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Information for unigene UN61812
| FASTA Sequence |
| Unigene ID: UN61812 | Length: 621 |
SSR | | ATGCATTCAAAAATCAAATGTGTGTTTGATTAGCAGCATTCAGACAAAAACTCTGGCAGCTGCACACTATAACTTTTTGGTCCTGT
GACATTACATGATTCCTATGACCAACACATTTATATAACAGCTTCTCCTATGGCAGTGTTAGCCTCGTCTTGTGGTGTTTCTGGTC
TCACATATATATATATACGTGTGAATCAAGACACTGAATATGTGCTTCTCTTGATTTTGGGCTATGATGACGAGGCAAGGTTGGTG
ACACCAAAGTAAAGAGTCTTCTGGTTGAAAGCATTTATGGCATAATCAACCTGAAGGTGACTCAGCGGAAACTTGAACCGTATCCC
ATACCCGAATCCATACCCAAACCCTGGCTTCCCATGTCTCAACGACGGGTTTCCGGGGACAAGACGGCTTGAACCAAGGTCCGTTC
CACAATCCAAGAAAATTGTTCCTTCTGTCATCTTGTTCAAAGGCAATGCCAATTCTGTATTAACAACGAGGCAAGACCGTCCGGAT
CCAACAGCGCCCTCACCATATCCACGAACGCTGCCTAGCCCACCAATGGCAAATGCTTGATAAGGAGCCATGTCTCCTACAATCGA
CCCACCTGTCAGGCTTGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190002 Outer membrane OMP85 family protein [Arabidopsis thaliana] | 639 | 8e-065 |
| XP_002877323 hypothetical protein ARALYDRAFT_484837 [Arabidopsis lyrata subsp. lyrata] | 630 | 8e-064 |
| CAB88424 putative protein [Arabidopsis thaliana] | 603 | 1e-060 |
| XP_002314252 predicted protein [Populus trichocarpa] | 533 | 1e-052 |
| XP_002264436 PREDICTED: hypothetical protein [Vitis vinifera] | 507 | 2e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C5J8 Outer envelope protein of 80 kDa, chloroplastic | 315 | 1e-028 |
| A2X208 Outer envelope protein of 80 kDa | 292 | 7e-026 |
| Q6H7M7 Outer envelope protein of 80 kDa | 291 | 9e-026 |
| Q43715 Protein TOC75, chloroplastic | 183 | 3e-013 |
| Q9STE8 Protein TOC75-3, chloroplastic | 180 | 6e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5PP51 At3g44160 | 639 | 5e-065 |
| Q9LXP7 Putative uncharacterized protein F26G5_110 | 603 | 8e-061 |
| B9HQ67 Predicted protein | 533 | 1e-052 |
| B9GHL6 Predicted protein | 503 | 3e-049 |
| B4FC77 Putative uncharacterized protein | 493 | 5e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G44160.1 chloroplast outer membrane protein-related | 640 | 3e-067 |
| AT3G48620.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: outer membrane; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184); BEST Arabidopsis thaliana protein match is: chloroplast outer membrane protein-related (TAIR:AT3G44160.1); Has 304 Blast hits to 304 proteins in 68 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). | 576 | 8e-060 |
| AT5G19620.1 OEP80 (OUTER ENVELOPE PROTEIN OF 80 KDA) | 315 | 1e-029 |
| AT3G46740.1 TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III); P-P-bond-hydrolysis-driven protein transmembrane transporter | 180 | 6e-014 |
| AT4G09080.1 TOC75-IV | 177 | 1e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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