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Information for unigene UN61916

FASTA Sequence
Unigene ID: UN61916Length: 669 SSR 
GGACAAACGAAGGCAATATAGTAGTACTTGGTCGTTGTCCTGATCAAAAAAGAAAGCAAAAAGTAGAAGACAAATCGTTTATATAC
CATTGATAGATCGATGGAGGAGCAGCAAGGCCACGAAAAGGATAAAATTGCTTCATCGTTTTCCTCAGAAAGAGGAAGAAGAGAGG
TGACTGAGATAATAATCAACGATGATGCGTTGGAAGAGATAATGCTGAGGCTTCCGGTAAAATCCCTTATAAGTTTCCAAGCCGTG
TCTAAACACTGGAGACGTATGATAACGCATAAGTCGTTCAGGGAGAGATACATGTTGCATCAGAAAACCCTAGAACCCAAATTGAT
CTGTGTCTACAATGATATAGACTGTTATAAGGCAAACTATGCTCTAAAAGAGATGAGGTTGGAGTGGTCTTCGGCATGTTAGTTGC
AGTGGAAGAAGAAGAAGAAGTTTATCATATTAGTAATGATCATGAACAAGAAGATGTGATGGTTTCCAAGAGTCTAGATGGTCTTT
TCTGCTTCTATGGACGTACAAACTTTAAAACCCCAATTAAAGTGATGAACCCATCCACTAGATGGTCCTTCACGCTCCCTCTGGCC
AGTATTCAGCTAGTGCATTTAGACAGCAATGTAGAGTTTTCTCTACCGGATTTGGAAAGACTATGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876799 hypothetical protein ARALYDRAFT_904436 [Arabidopsis lyrata subsp. lyrata]1882e-012
NP_178312 F-box protein [Arabidopsis thaliana]1792e-011
XP_002875106 predicted protein [Arabidopsis lyrata subsp. lyrata]1783e-011
BAB01325 unnamed protein product [Arabidopsis thaliana]1712e-010
NP_566771 F-box protein [Arabidopsis thaliana]1712e-010

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZPS1 Putative F-box protein At2g020301791e-012
Q0WRU9 F-box/kelch-repeat protein At2g434401252e-006
Q3E9Z8 Putative F-box protein At4g177801224e-006
Q9LPW2 Putative F-box/kelch-repeat protein At1g128701224e-006
Q8S8Q9 F-box/LRR-repeat protein At2g432601199e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LSU8 Gb|AAD17449.11711e-010
C7SI15 Putative F-box protein1307e-006

Arabidopsis top hits (Blast detail)Scoree value
AT2G02030.1 F-box family protein1799e-014
AT3G25550.1 F-box family protein1718e-013
AT2G43445.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43440.1); Has 621 Blast hits to 612 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 619; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).1252e-007
AT1G12870.1 S locus F-box-related / SLF-related1224e-007
AT4G17780.1 F-box family protein1224e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members