Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN61945

FASTA Sequence
Unigene ID: UN61945Length: 286 SSR 
GGATCCTAACATCTCCGCGTCATCGTTCATCGTCGACATCAGAAGGCGATTCAGTTAGCTAAACAAGAGAAGAGAAGAGAAGAGAA
GAGAAGGATGGTGGGAAGTGGAGCTCCACAGAGGGGAAGTGCAGCTGCAGCAGCTAGCATGCGTAGGAGGAAGCCTAGCGGAAGTG
GAGGAGCCTCTGGTGGTGGCGGTGCTGCAGGATCTATGCTTCAGTTCTACACGGATGACGCACCTCTCAAGATCTCCCCTAATGTT
GTCCTTGTCATGAGCATTGGTTTCATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182033 protein transport protein sec61 subunit beta [Arabidopsis thaliana]2666e-022
XP_002881995 SEC61 beta [Arabidopsis lyrata subsp. lyrata]2666e-022
NP_191613 Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana]2495e-020
XP_002878341 SEC61 beta [Arabidopsis lyrata subsp. lyrata]2495e-020
BAC42429 putative transport protein subunit [Arabidopsis thaliana]2461e-019

Swiss-Prot top hits (Blast detail)Scoree value
P38389 Protein transport protein Sec61 subunit beta2662e-023

TrEMBL top hits (Blast detail)Scoree value
B9DGF7 AT2G45070 protein2664e-022
Q9M206 Transport protein subunit-like2494e-020
Q8GY93 Putative transport protein subunit2468e-020
A9P911 Predicted protein2404e-019
A9P839 Putative uncharacterized protein2333e-018

Arabidopsis top hits (Blast detail)Scoree value
AT2G45070.1 SEC61 BETA; protein transporter2662e-024
AT2G45070.2 SEC61 BETA; protein transporter2662e-024
AT2G45070.3 SEC61 BETA; protein transporter2662e-024
AT2G45070.4 SEC61 BETA; protein transporter2662e-024
AT3G60540.1 sec61beta family protein2491e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members