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Information for unigene UN62003
| FASTA Sequence |
| Unigene ID: UN62003 | Length: 763 |
SSR | | GGGACGTCTCTCCCTCTCTCTCTCTCTCCCCATGGGAAATGCGAACGGCAAAGAAGAAGAAGGCGATGCCACGTCATCTTCGGCGA
CCTCGAACGCCGGCGATCCTTCCTGCCACACTCGTCAACGTCGCCCTTCCTCAGAATCTATGAACAGTTCTCCTCCGGGAAGCCCA
GCTCGATCTCCTTCTCCTTTCTTATTCGCTCCTCAGGTTCCAGTGGCTCCATTGCAAAGAGCATACGCCCCTCCTTCCCCTAATAA
AATCCAGTGGAACCAATCTCAAAGGGTTCTTGATATTCCCCAAGAGCAAGGGATCCCTATTATCATTACATGGAACCAAGGAGGTA
ACGATGTGGCAGTGGAAGGATCATGGGACAACTGGAGACCAAGGAAGAAGCTGGAGAAATCTGGAAAAGACCACTCAATTCTCTTG
GTCCTTCCATCTGGCATATACCACTACAAGGTTATTGTCGACGGTGAATCCAAATACATCCCAGATTTGCCCTTTGTATCAGACGA
AAGGGGCACTGTCTTTAACATTCTCGATGTTCATAACTTTGTGCCAGAAAACCCAGAAAGCATAGCGGAGTTTGAGGCCCCACCTT
CACCTGATCATAGCTACGGACAAGCCCTCCCAACAGCAGAGGATTTCACAAAAGATCCACTCGCGGTGCCACCTCAGCTTCGTCTA
CACTTGTGGACACTAGTGACGAAACAGCAAAGCCACAAAGCCTCAGCATGTGGTGCTTAACATGTGTTCATAGAG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_197615 SNF1-related protein kinase regulatory subunit beta-1 [Arabidopsis thaliana] | 980 | 4e-104 |
| CAB64718 AKIN gamma [Arabidopsis thaliana] | 963 | 3e-102 |
| XP_002871972 AMP-activated protein kinase [Arabidopsis lyrata subsp. lyrata] | 763 | 5e-079 |
| NP_001031918 SNF1-related protein kinase regulatory subunit beta-1 [Arabidopsis thaliana] | 749 | 2e-077 |
| AAO61676 AKIN beta1 [Medicago truncatula] | 692 | 9e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84VQ1 SNF1-related protein kinase regulatory subunit beta-1 | 980 | 2e-105 |
| Q9SCY5 SNF1-related protein kinase regulatory subunit beta-2 | 522 | 2e-052 |
| Q04739 SNF1 protein kinase subunit beta-3 | 131 | 5e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29Q48 At5g21170 | 980 | 2e-104 |
| Q2V357 Uncharacterized protein At5g21170.2 | 749 | 1e-077 |
| Q7XYX8 AKIN beta1 | 692 | 6e-071 |
| Q4VYF4 SNF1-related protein kinase regulatory beta subunit 1 | 691 | 8e-071 |
| Q5QIV5 GAL83 (Fragment) | 661 | 2e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit, putative | 980 | 2e-106 |
| AT5G21170.2 5'-AMP-activated protein kinase beta-2 subunit, putative | 749 | 9e-080 |
| AT4G16360.1 AMP-activated protein kinase | 504 | 2e-051 |
| AT4G16360.2 AMP-activated protein kinase | 487 | 2e-049 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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