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Information for unigene UN62149
| FASTA Sequence |
| Unigene ID: UN62149 | Length: 787 |
SSR | | GGATATCTTTGAGTTATGAAGACTTACCTTCTCACTTGAAGCACTGCTTTCTTTACCTAGCTCATTTTCCGGAAGATCATGAGATA
CAAACAGAGACATTGTTTAATTACTGGGTCGCAGAAGGGATAGTGATGGTGAGTAGTGAAGTGAGTACTATTGTAGATGTTGCAGA
GGAATGCCGTGACATCGAGAATCGAATCTTGTCGTCTACATGATGTGGTTAGAGAAGTCTGTTTGTTTAAAGCCAAACAAGAAAGT
TTCATGCAAGTTTTAAATGCTCACAGTAATGTCTCGGATGCTACAAACAGATCACGCAGAGTCGCTGTACATTTAGTTGATGATGA
TGATGAAAACGAACCTGTTATATTTCAGCAGAGGAAGATTCAAACCCCCAAAGCAAGGGCCCTATTGTATATCACTAGAGACTTCC
ATCCTTGGATATTATCAACCCGGAGTTTTCGAGGCTTACGATCTCTTAGAGTGTTGGATCTCTTTGGAGCTCAGTTCAGAAGACGC
AGGTTACCTAAGAGCATAGGGAAGCTCATCCACTTGAGGTACTTGAGTTTGAAAGAGACAAACTTGTCTGTGTTACCATCTTCTCT
AGGGAATCTAGAGCTGTTGGTTTATCTGGATTTAGAGATTTACGAGACAATGGTTCACATCCCAAATGTCTTAAAGAAGATGAAGA
AGCTGAGATATCTTATGTTACCTGATGAACTCAGCAAGAAACAAAGTTGGAACTATGTAGTTTAGTGAAGTTGGAGACTCTCAAGA
ACTTCTCGTTAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872017 predicted protein [Arabidopsis lyrata subsp. lyrata] | 656 | 1e-066 |
| XP_002888207 predicted protein [Arabidopsis lyrata subsp. lyrata] | 399 | 9e-037 |
| NP_176137 putative disease resistance protein RXW24L [Arabidopsis thaliana] | 398 | 1e-036 |
| XP_002886692 predicted protein [Arabidopsis lyrata subsp. lyrata] | 387 | 2e-035 |
| NP_176135 CC-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 365 | 8e-033 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C646 Probable disease resistance protein RXW24L | 398 | 5e-038 |
| Q9XIF0 Putative disease resistance protein At1g59780 | 366 | 3e-034 |
| Q8W3K3 Putative disease resistance protein At1g58400 | 355 | 5e-033 |
| Q8W3J8 Probable disease resistance protein RDL5/RF45 | 353 | 9e-033 |
| Q94HW3 Probable disease resistance protein RDL6/RF9 | 343 | 1e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WNF7 PRM1 homolog | 353 | 1e-031 |
| Q3ECM3 Putative uncharacterized protein At1g58807.1 | 353 | 1e-031 |
| D1GEH7 Disease resistance protein | 328 | 1e-028 |
| Q6XWA0 Resistance candidate RPP8-like protein (Fragment) | 325 | 2e-028 |
| C6FF62 CC-NBS-LRR class disease resistance protein | 270 | 6e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G58410.1 disease resistance protein (CC-NBS-LRR class), putative | 398 | 5e-039 |
| AT1G59780.1 disease resistance protein (CC-NBS-LRR class), putative | 366 | 2e-035 |
| AT1G58390.1 disease resistance protein (CC-NBS-LRR class), putative | 365 | 3e-035 |
| AT1G58400.1 disease resistance protein (CC-NBS-LRR class), putative | 355 | 5e-034 |
| AT1G58807.1 disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative | 353 | 8e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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