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Information for unigene UN62180
| FASTA Sequence |
| Unigene ID: UN62180 | Length: 768 |
SSR | | GGAAGGTGACTAAAACCCCATCTCTCTCTCTCTCTCTCTGTCTTCACTTGTGTATACAATCAAAATGGCTTCCGTCGCTCTTCGTA
ACCCTAGCTCGAAGCGCCTTCTCCCGTTCTCTTCTCAGATCTACTCACGTTGCGGTGGTTCCATCACTTCGTCTTCTCCCGCGATC
TCTCATTCCGTCGGAGGAGATGATCTCTCTCCTCCGTCAAGTTACGGAGCTTCTCTGTGGAGATCGATGGCCACATTCACTCGAAA
TAAACCTCATGTAAATGTAGGAACAATTGGGCATGTAGATCACGGGAAGACCACTTTAACTGCTGCAATCACAAAGGTTCTTGCTG
AAGAGGGCAAAGCTAAAGCTATTGCCTTTGACGAAATTGATAAAGCTCCTGAAGAGAAGAAGAGAGGAATTACTATTGCCACGGCT
CATGTGGAGTATGAGACTGCTAAGCGTCACTATGCTCATGTCAATTGCCCCGGTCACGCTGATTATGTTAAAAATATGATTACTGG
AGCTGCACAAATGGATGGTGGGATTCTTGTGGTTTCAGGTCCGGATGGACCCATGCCTCAGACCAAGGAACATATTCTACTTGCAC
GTCAGGTTGGCGTTCCATCACTTGTGTGTTTCCTGAACAAAGTTGATGTGGTTGATGATCCAGAGTTGTTGGAGCTTGTGGAGATG
GAACTGCGTGAACTTTTGAGCTTCTACAAGTTTCCAGGGGACGATATTCCCATCATCCGAGGATCTGCTCTGTCTGCACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872804 hypothetical protein ARALYDRAFT_490266 [Arabidopsis lyrata subsp. lyrata] | 1107 | 7e-119 |
| NP_192202 Elongation factor Tu [Arabidopsis thaliana] | 1102 | 3e-118 |
| CAA61511 mitochondrial elongation factor Tu [Arabidopsis thaliana] | 1065 | 5e-114 |
| XP_002892157 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1050 | 3e-112 |
| XP_002524809 elongation factor tu, putative [Ricinus communis] | 973 | 2e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZT91 Elongation factor Tu, mitochondrial | 1102 | 1e-119 |
| Q07KJ2 Elongation factor Tu | 766 | 1e-080 |
| Q0BUQ2 Elongation factor Tu | 762 | 3e-080 |
| Q211E6 Elongation factor Tu | 759 | 7e-080 |
| Q134R0 Elongation factor Tu 2 | 756 | 2e-079 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WUV8 Elongation factor Tu | 1102 | 2e-118 |
| B9SFP0 Elongation factor Tu | 973 | 2e-103 |
| B9IA13 Elongation factor Tu | 965 | 1e-102 |
| A5BV56 Elongation factor Tu | 962 | 3e-102 |
| B9GTD8 Elongation factor Tu | 957 | 1e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G02930.1 elongation factor Tu, putative / EF-Tu, putative | 1107 | 3e-121 |
| AT4G20360.1 ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B); GTP binding / GTPase/ translation elongation factor | 694 | 2e-073 |
| AT1G07920.1 elongation factor 1-alpha / EF-1-alpha | 199 | 6e-016 |
| AT1G07930.1 elongation factor 1-alpha / EF-1-alpha | 199 | 6e-016 |
| AT1G07940.1 elongation factor 1-alpha / EF-1-alpha | 199 | 6e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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