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Information for unigene UN62232
| FASTA Sequence |
| Unigene ID: UN62232 | Length: 583 |
SSR | | GAGCTTATTGATGAGGATGTGGAGGATGCTGTGTTTGATGAGTACATGGAAGGAAGAGGAGGAGGAGGAGGAGGAGGTACAGAGTA
TAATGATAAGGTTGGTAGGAAGAGGAAGAAGGAGAAAGAGAGAAGTAGTAGTGGGAAGGAGAAGAGGTATAAGCTCCCAAGCCGCG
GTGAGAGGAAGTCTGAAGAGATTGATGAGATGTGGAAATCTATTGCAGATAATGACCCTGAGAATGATGAAGAAGGTGTTAGGACT
ATGGATGACGATAATTTCATTGATGATACTGGTGTGGATCCTTCTGAGAGGTATGGAGGTGATGGGGGAGACCGTTCTCCAACTCA
CTATCCTCAGGCAGAGGAGGGTGAGGATGATGATGAGGTTAATAACCTTTTCAAAATGGGAAAGAAAAAGAAGAAGGCTGAAAGAA
ATCCTGCGGAAATCGCTCTCTTGGTTGAGAATGTGATGGCTGAGCTTGAGGTCACTGCTGAGGAAGATGCAGATCTTAACAGACAG
GGGAAGCCTGCTATCAACAAGCTCAAGAAACTTTCCCTTCTTACCAATGTTCTCGGAGAGAAGCAGC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002893702 hypothetical protein ARALYDRAFT_473395 [Arabidopsis lyrata subsp. lyrata] | 879 | 1e-092 |
| NP_174492 Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] | 868 | 2e-091 |
| NP_001185126 Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] | 868 | 2e-091 |
| AAG23443 unknown protein [Arabidopsis thaliana] | 813 | 4e-085 |
| XP_002519849 Transcription factor IWS1, putative [Ricinus communis] | 541 | 2e-053 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FVQ8 Putative uncharacterized protein F3C3.8 | 813 | 3e-085 |
| B9S1I4 Transcription factor IWS1, putative | 541 | 1e-053 |
| A5BWS3 Putative uncharacterized protein | 511 | 3e-050 |
| B9GZK2 Predicted protein (Fragment) | 499 | 8e-049 |
| B9MU81 Predicted protein | 487 | 2e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G32130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TFIIS N-terminal (InterPro:IPR017923), IWS1, C-terminal (InterPro:IPR008654); BEST Arabidopsis thaliana protein match is: IWS1 C-terminus family protein (TAIR:AT4G19000.1); Has 907 Blast hits to 871 proteins in 182 species: Archae - 4; Bacteria - 14; Metazoa - 417; Fungi - 195; Plants - 42; Viruses - 8; Other Eukaryotes - 227 (source: NCBI BLink). | 868 | 9e-094 |
| AT4G19000.1 IWS1 C-terminus family protein | 188 | 7e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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