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Information for unigene UN62236
| FASTA Sequence |
| Unigene ID: UN62236 | Length: 775 |
SSR | | GGGACCTATCTCCGCCTCACTCACTCACTCACTCACTCACTCACTCACTCACTAGCTTCTCCTCTCCCACTAGCTCTCCCACGTTA
ACACGCCCACCTGATCCGATTATCAAAAGCACCAAAGCTTGGTATATATATCTACGATCCGAGCAATGGCTTTGGTGATGCACGCG
TACAAGGGAAACAAAAACTCTGAGAAGGCACTCATTGCCGCAGAGTTCACTTGTGTGAAGATCGATGTGGCTCCTGGCTTTGAGAT
GTTTGTCACCAACCAAACCCCTCAGTTCCTCAAGATGAACCCTTTGGGAAAGATTCCTGTACTTGAGACTCCTGAGGGTCCTATCT
TTGAGAGCAACGCCATTGCTCGTTATGTAAGCAGATTGAACGGTGACAACTCCTTGAACGGCTCCTCCCTCATCGAATATGCACAT
ATTGAGCAATGGATTGATTACTCCACAATGGAAATTTACGCACACATCTTCGACTGGTTCGTCCCTAGAATGGGCTATATTCCATA
CAGTGCTCCGAGTGAGGAAGCTGCTATCTCTGCTTTGAAAAGGGGACTTGAGGCTCTGAACACACATCTTGCTTCCAACACTTACC
TTGTTGGACACTCTGTTACCCTAGCTGATATCATCACTGTCTGCAGCTTGAACCTGGGCATGACCAGTGTCATGACCAAGAGCTTC
ACCTCTGCTTTCCTCACGTTTAGAGTACTTCTGGACTTGATCACCAGCCAACTTCAGAGTTGTGGGTGATGTCAACAGACTGATCT
G
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892012 hypothetical protein ARALYDRAFT_474857 [Arabidopsis lyrata subsp. lyrata] | 762 | 7e-079 |
| NP_176084 elongation factor EF-1 gamma subunit [Arabidopsis thaliana] | 760 | 1e-078 |
| AAK59587 putative elongation factor 1B gamma [Arabidopsis thaliana] | 760 | 1e-078 |
| BAH56923 AT1G57720 [Arabidopsis thaliana] | 760 | 1e-078 |
| NP_563848 elongation factor EF-1 gamma subunit [Arabidopsis thaliana] | 745 | 6e-077 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FVT2 Probable elongation factor 1-gamma 2 | 760 | 5e-080 |
| O04487 Probable elongation factor 1-gamma 1 | 745 | 3e-078 |
| Q9FUM1 Elongation factor 1-gamma | 660 | 2e-068 |
| Q9ZRI7 Elongation factor 1-gamma 1 | 651 | 2e-067 |
| Q6YW46 Elongation factor 1-gamma 2 | 648 | 5e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z2J4 AT1G57720 protein | 760 | 8e-079 |
| B9DHI9 AT1G09640 protein | 745 | 4e-077 |
| C0Z2L8 AT1G09640 protein | 745 | 4e-077 |
| Q8S3W1 Elongation factor 1-gamma | 659 | 4e-067 |
| A9PE52 Gamma class glutathione transferase EF1Bgamma2 | 652 | 3e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G57720.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 760 | 5e-081 |
| AT1G57720.2 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 760 | 5e-081 |
| AT1G09640.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 745 | 3e-079 |
| AT2G30860.1 ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase | 136 | 1e-008 |
| AT2G30870.1 GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10); copper ion binding / glutathione binding / glutathione transferase | 119 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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