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Information for unigene UN62246

FASTA Sequence
Unigene ID: UN62246Length: 803 SSR 
GGACCCTCCCTTATGAGAAGAGAACGTCACACGCCTACAATCCTTTTATTTTATTACCGGTAAAAGCCTCAGTGACTAGTGATGAT
GCAGAGAGAGAGAGAGTTGGGTAGTTCCGACGACAGCCACTGTCTTCCTACCCCATGTTCATCCGACGAACTCTCTAGCATTCTCC
GGCAGATTCTCTCACGTGCTCCGACGACTCAACCTTCGTCCCCACCGAAGAGAAACGTTTCCTCCGCTGAGATGTTCGACCGGAAC
TTCTCTTTCGTTTCCGGCGGAGCGGTTTCTACCGTCGCCGCCGGCTATGCGGTCGCTGAAAATGGGGAAGACAAATGTGCTTTTGA
GGACAAGAGAAATGGAGTCAAACAGCGAAACTCGTTGAAGAGAAACATTGATGCACAGTTCCACAACTTGTCTGAAAAGAGGAGGA
GGAGCAAGATCAACGAGAAAATGAAAGCTTTGCAGAAACTGATTCCCAATTCCAACAAGACAGATAAAGCCTCAATGCTTGATGAA
GCTATAGAATATCTGAAGCAGCTTCAGCTTCAAGTGCAGACTTTAGCCGTTATGAATGGTTTAGGCCTCAACCCTCTGCGGCTACC
ACCAGTTCTACCTCCTACGCAGACAAAGATGATCAGTGGAACCTTAGAACAAGACCTCAACTTTGAGACTCTGCTCGGTGCTCCTC
ACTCGCTGGCTATCATGAACCATCCGAAGCACTCAGAATGTGCTTTTCCACAGCCACTCTGCTTGAGACACGTTGAGACAGTGAGA
TGATTCAAGTCAAGATCTCTTATAATCTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201512 transcription factor ALC [Arabidopsis thaliana]7205e-074
BAD43719 putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis thaliana]7152e-073
AAM61195 unknown [Arabidopsis thaliana]7152e-073
CBY05409 ALCATRAZ-like protein [Lepidium campestre]6588e-067
CBY05403 ALCATRAZ-like protein [Lepidium appelianum]5711e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q9FHA2 Transcription factor ALC7311e-076
Q9FUA4 Transcription factor SPATULA3036e-027
O80536 Transcription factor PIF32435e-020
Q8GZ38 Transcription factor UNE102382e-019
Q8W2F3 Transcription factor PIF42363e-019

TrEMBL top hits (Blast detail)Scoree value
Q680B1 Putative bHLH transcription factor (BHLH073/ALCATRAZ)7151e-073
Q8LFU9 Putative uncharacterized protein7151e-073
B9SC94 Putative uncharacterized protein3315e-029
B9MVT5 Predicted protein3271e-028
B9R797 Putative uncharacterized protein3262e-028

Arabidopsis top hits (Blast detail)Scoree value
AT5G67110.1 ALC (ALCATRAZ); DNA binding / transcription factor7202e-076
AT5G67110.2 ALC (ALCATRAZ); DNA binding / transcription factor4442e-044
AT5G67110.3 ALC (ALCATRAZ); DNA binding / transcription factor3422e-032
AT4G36930.1 SPT (SPATULA); DNA binding / transcription factor3035e-028
AT1G09530.1 PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator2435e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members