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Information for unigene UN62292
| FASTA Sequence |
| Unigene ID: UN62292 | Length: 717 |
SSR | | GAAGAAGAGTTATGAAACAAAAGGAATCCAGAGTTATCTAGTCTCTCTCTCTCTCTCTCTATCTCTCCCCTTTCTCTCATTCCCAA
TTCACGATTTGAAAAACAATCGATGGGTAGCAAACGCGGGAGGTCGGTGATATCCGCGATCTTCATCTTCTTCGCGATGTCATGCT
TTAATTCCATCTCAACTACTCAGGTTGGAATGTCCGATTCGGACACGTTTTGTATCTCGGATCATTACGTCATGCAGTCCTATTTC
ACGACACAGAGCTCCTCCTTAAACGAGTCAGAGTTTCGAAGCTTCCTGCGTCTTCGACAATGTTCTGAGAACATTTCTTATGAAGA
TGATGCTCCTGCTGTAGCAATGCTACAACACAGAGACATAACAGGTGAAGGTTCGCATCGTCATCTACTCACATCCATCAAGCTTC
GTCCTTTTCAGTCGCAGTCTCAGTTTCGCGAGCTTGTGATCGTTGAACGGTTGCCTTTGGGTGTTTTTGCTGATCCTTTTGAGCTT
CACGGTCTTCAACAACGCAGAGCTTTCAGAGATGTTTCTGTGTTTGGAGACACGGATCTCGAGCAGCCTTCGTTCAGATCAAACAA
GTCTGTTGTTGAGATTCATGTCGAGACATGTACCGAACCAGGGACAAGAACAAAGAAGATGTTTGGTTTTGTCGATGGCAGATCAA
AGAGCAAACCAGATCCGTTGTTTGGGAAA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_001190481 phosphatidylinositol glycan, class X [Arabidopsis thaliana] | 563 | 7e-056 |
| NP_001190482 phosphatidylinositol glycan, class X [Arabidopsis thaliana] | 553 | 1e-054 |
| NP_199497 phosphatidylinositol glycan, class X [Arabidopsis thaliana] | 509 | 1e-049 |
| XP_002865156 predicted protein [Arabidopsis lyrata subsp. lyrata] | 473 | 2e-045 |
| ACU16701 unknown [Glycine max] | 243 | 9e-019 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LUK5 Genomic DNA, chromosome 5, P1 clone:MSD23 | 509 | 9e-050 |
| C6T4T0 Putative uncharacterized protein | 243 | 6e-019 |
| B9SRC7 Putative uncharacterized protein | 237 | 3e-018 |
| A5BYQ3 Putative uncharacterized protein | 232 | 1e-017 |
| B8BMT8 Putative uncharacterized protein | 230 | 2e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G46850.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PIG-X/PBN1 (InterPro:IPR013233); Has 52 Blast hits to 52 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 4; Plants - 13; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | 509 | 6e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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