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Information for unigene UN62298

FASTA Sequence
Unigene ID: UN62298Length: 565 SSR 
GGAAAGCTTCAAACAAACAAACCAACAAACAAACGAACACACACATTGAATGATCTCCGTTTCCTTTGGATTCACTCTCGCGCAAA
ACACACAACAACAACAACAAATATAATATCTTTCTCAGTAGTTGCTGACTTGTAGTAACATCTCACCTAATCTCCTAAAGATCTAA
ACTTTTAATCTCATTTTCTCCGATGTTATTCTTCTTCTGATCTCCCGCAAAACAGAGAGAATGGTGGAACCACTTCCCATAACTCG
GAGGCGTTTCCTCTCATCCCACAGATCCCTCGTCACCGTCTTCTGGATCGCAGCCTTCGCTTCCTTGTTCATCTGGCAATCCCGCG
GCAGAGGAGGTTCCTCCTCTCTATATCGCGTTAATGGTGGTCTCTCCTCTGTTTTCTGGTGGACGGCGACGACACTACCAACAACT
ACCGCCGCCGGCGAATTCCCTCGGCTTAGACCATTCGCCTTCAATCTGACGGACTTCGGAGCGGTGGGGGATGGGGTCACCGTCAA
CACCGAGGCGTTCGAGAGAGCTGTCTACGCAATCTCGAAAGTTTCGAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABM30197 polygalacturonase [Brassica juncea]5043e-049
XP_002877258 glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp. lyrata]3332e-029
AAN28906 At3g42950/F18P9_110 [Arabidopsis thaliana]3134e-027
NP_189881 Pectin lyase-like protein [Arabidopsis thaliana]3134e-027
XP_002890322 glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp. lyrata]2122e-015

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A1Z1S2 Polygalacturonase (Fragment)5042e-049
Q8H1N7 At3g42950/F18P9_1103133e-027
Q9M1L0 AT3g42950/F18P9_1103133e-027
Q8RXF9 Putative uncharacterized protein At1g191701994e-014
Q9LMA9 T29M8.4 protein1994e-014

Arabidopsis top hits (Blast detail)Scoree value
AT3G42950.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein3132e-029
AT1G19170.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein1993e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members