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Information for unigene UN62327

FASTA Sequence
Unigene ID: UN62327Length: 693 SSR 
GGATACACTCACACACGCTAATTAATATCACCATTATTACATAATCGTATACCATACGTAGACACACACATACAGGAGAGAAAAAG
AGAGATGAAAGATAGGATTGAGCGATTTGTGGTATTGCCGTTTTCATTGGGGTGCTCAACGCAATCCAGCGTCGCCGTGGCTGCTA
GTCATCAACACAAGAAATCGAACCAACTCATCGAGAGGAGAGAAAAAAGTTGCTTGTTTCTAAAAGAAGAGGCAAAGGTAGAGAAC
AATGGTGCTAATACCTCAGATGGTATCTACAAAATTGTCCGAAGCTTCAAGAGTTTTTCTCACTTCTTCATTAGATACGAAGAGGA
GAGGGAGGTGGAGATGGAGATAGGGCTTCCAACGGACGTGAAACACTTGAGCCACATCGGAGTTGATGGAACCATGACCACTTTTG
ACTTCTGTTCCACCTCCTTATCCTCCTCCTCCTCCTCCTCCTCACCTTTTCCATTCTCCCGTTTCCACCTCACTGCCGTCTGAGTT
AACATTTACATGCTTAAAGCTTTAAATCAACTTTTAGAGTATACATCGTTTTCTTTCCTTTTTTTTTTGTTTCACCATGGTTTTAC
TGTATATATGTATTGTGATATAGAAAACTTTCGGCTGAAAAAATAAACTCAGTTCCAATATAAATGAATTTGTCTCTTTTCTTGTT
CTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAC83627 Rop-interacting protein [Arabidopsis thaliana]3002e-025
NP_564281 ROP-interactive CRIB motif-containing protein 2 [Arabidopsis thaliana]3002e-025
XP_002893463 Rop-interacting protein [Arabidopsis lyrata subsp. lyrata]2813e-023
XP_002301646 predicted protein [Populus trichocarpa]2511e-019
AAF99747 F17L21.16 [Arabidopsis thaliana]2071e-014

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GYU0 At1g273803001e-025
Q8VWR4 Rop-interacting protein (Fragment)3001e-025
B9GUA0 Predicted protein2517e-020
Q9FZJ8 F17L21.162079e-015
C5XG85 Putative uncharacterized protein Sb03g0438401721e-010

Arabidopsis top hits (Blast detail)Scoree value
AT1G27380.2 RIC2 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 2)3081e-028
AT1G27380.1 RIC2 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 2)3081e-028
AT5G16490.1 RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4); protein binding1978e-016
AT1G61795.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10) (TAIR:AT4G04900.1); Has 94 Blast hits to 94 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1134e-006
AT2G33460.1 RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1); protein binding1101e-005

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members