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Information for unigene UN62341
| FASTA Sequence |
| Unigene ID: UN62341 | Length: 508 |
SSR | | GGGTGACTCTTATCACCGATGGGGATCTCCTTTAGCACCAACAGAAGACGACACAACAACCGCCGTCACCTCCTCCTCCACCACCA
CCACCATCCTCCACCGCCTTACTATTATCTCGACCCTCCTCCACCTCCACCGCCGCAGCCATTTCAACCGCATTATGACTACAATT
ACTCAACTTACCACCACATATCTCCACCTCTACAACCACCACCGCCACGGATCAACACTTGTTCCTACGGTCATCCTTACCATTAC
TACCCTCAACATCCACAGTATCTCACCACCGCACAGCCCAATTGGTGGGGTCCAACGATGAGACCTGGATTTGTCAGCCCGCAAAC
GCAAATGCAAACGCAAATGCAGCCTCTTCCACCACCGCCATACGTGGAGAATCAGAACGCCAAGAAGGTGAGGAACGATGTCAATG
TGCATAGAGATACGTTGAGGCTCCAAGTAGACGAGTCTGTCCCTGCCCACCATCTACTTTCCTTCGTCTTCGATGCTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAF30307 putative RING zinc finger protein [Arabidopsis thaliana] | 642 | 2e-065 |
| XP_002884561 hypothetical protein ARALYDRAFT_317476 [Arabidopsis lyrata subsp. lyrata] | 639 | 4e-065 |
| NP_566274 RING/U-box domain-containing protein [Arabidopsis thaliana] | 625 | 2e-063 |
| XP_002517156 mahogunin, putative [Ricinus communis] | 383 | 2e-035 |
| AAM78102 AT5g19080/T16G12_120 [Arabidopsis thaliana] | 349 | 2e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q5VYV0 Forkhead box protein B2 | 136 | 5e-008 |
| Q1A1A1 Forkhead box protein G1 | 134 | 9e-008 |
| Q1A1A5 Forkhead box protein G1 | 125 | 1e-006 |
| Q2VWA4 Ladybird homeobox corepressor 1-like protein | 124 | 1e-006 |
| A7M7C7 Ladybird homeobox corepressor 1-like protein | 123 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M8K4 Putative RING zinc finger protein | 642 | 1e-065 |
| Q8LA32 At3g06140 | 625 | 1e-063 |
| B9RTT7 Mahogunin, putative | 383 | 2e-035 |
| Q84ME1 At5g19080/T16G12_120 | 349 | 1e-031 |
| Q8L7V9 AT5g19080/T16G12_120 | 349 | 1e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06140.1 zinc finger (C3HC4-type RING finger) family protein | 625 | 1e-065 |
| AT5G19080.1 zinc finger (C3HC4-type RING finger) family protein | 349 | 1e-033 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 127 | 6e-008 |
| AT3G53410.1 zinc finger (C3HC4-type RING finger) family protein | 125 | 1e-007 |
| AT3G09770.1 zinc finger (C3HC4-type RING finger) family protein | 123 | 2e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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