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Information for unigene UN62348

FASTA Sequence
Unigene ID: UN62348Length: 792 SSR 
GGATTCTTCTTCTTCTAAAAAATCTCAACAGTACCTTTTTGTTTTCTTCCACTATAACTCTGAGAGCTATTGCTATTGCAGAAAAA
CAGTGAAAAATAGAGATGAGAAAGAAAGAGAGAGAGAGAGAGAGGGATCATGCTGATAAGAAGTTAGGCAAAACCAACTTTCTATT
TATGTATAATTAGGTCGATCACATCACCAATTTAACCTTTCTCCACCTCTAAATCTCCTTCACTTCTCCTCCTCACCTTCCAAAAT
TAGGGTTTGTTGCTTCTCTCTTTTATTTCTGAATTTTCAAAGCCACCCAATCTGGATTCAAGCCAAGAACCCAATCTTAGCCCACA
ATTAAAAGATCTGACTTCTAAAAGATGATGACCGACTTGTCACTTGGAAGAGAAGGAGAAGAAGACAAAGATGCAGAAGCAAAGAA
GCCCATAGAAGAAGTTGAGAGAGAGCACATGTTTGACAAAGTGGTGACTCCAAGCGACGTAGGGAAACTAAACAGACTCGTGATCC
CAAAGCAACACGCAGAGAGATACTTCCCTCTAGATTCATCCTCAAACGAGAAAGTTTGCTTCTAAACTTCGAAGATCTCACAGAAA
GTCATGGAGTTCCGTTACTCTTACTGGAACAGTAGCCAGAGCTATGTCATGACCAAAGTTGGAGCCGTTTCGTTAAAGACATGAAA
CTCGACGCCGAGATATGTGTCTTTCAGAGATGTGTCGGAGACAGCGCTGTGTATCGATGAGAGACGACTAAGTCCTGACTATCGAC
ATCGACTGCTCACTTGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAZ68123 NGATHA1 [Arabidopsis halleri subsp. halleri]3263e-028
XP_002862757 hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp. lyrata]3201e-027
NP_566089 B3 domain-containing transcription factor NGA1 [Arabidopsis thaliana]3164e-027
ACP18971 NGATHA1 [Arabidopsis thaliana]3164e-027
XP_002880271 hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp. lyrata]3155e-027

Swiss-Prot top hits (Blast detail)Scoree value
O82799 B3 domain-containing transcription factor NGA13162e-028
Q7F9W2 B3 domain-containing protein Os04g05814002821e-024
Q9M268 B3 domain-containing transcription factor NGA22803e-024
Q8LMR9 B3 domain-containing protein Os03g01209002751e-023
Q9MAN1 B3 domain-containing transcription factor NGA32704e-023

TrEMBL top hits (Blast detail)Scoree value
D4HU08 NGATHA13262e-028
C3VMM2 NGATHA13163e-027
B9RMW1 Putative uncharacterized protein2931e-024
C4JC54 Putative uncharacterized protein2876e-024
A5APE8 Putative uncharacterized protein2832e-023

Arabidopsis top hits (Blast detail)Scoree value
AT2G46870.1 NGA1 (NGATHA1); transcription factor3162e-029
AT3G61970.1 NGA2 (NGATHA2); transcription factor2802e-025
AT1G01030.1 NGA3 (NGATHA3); transcription factor2703e-024
AT4G01500.1 NGA4 (NGATHA4); transcription factor2507e-022
AT1G68840.1 RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor/ transcription repressor2301e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members