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Information for unigene UN62441

FASTA Sequence
Unigene ID: UN62441Length: 807 SSR 
GAAGGGTGGAAGCAGATAACATGTCTGCGATTGTCTGCGGCAGCAAGAGATCTCTGTTCGACGATTTGTCCGCCGCTTCTTCTTCG
CCTCCCGTCTCCAAGAAACTCCGTCGCTTTTCCTCATCTTCTCCGCCTCGTTTCTCCTCCTCCTCCTCGCTTCTTCTCCTCCATCA
CCTCGCCGCACTTTTCCCCGACATGGACAATCAAATTCTTGAGCGGGCAATCGAGGAATGTGGTGACGATCTTGATTCTGCTATTA
GATCTTTGAACCAGCTTCGTTTAGAATCCACCAATAAGGATTCAGAAGAAGCAGGAAGAGGAGGATCGTCAGAGAAAGAGGAAGTC
TTGAACTTGGATGGCACCGAGTGGGTTGAGCTCTTTGTGAGGGAGATGACGAATGCTTCAGACATGAAAGACGCTAAAGACCGTGC
TTCGAGAGCATTACAAGCGTTGGAGAAGTCCATCAACGCACGTGCAGGTGCCGACGCGGCCACGCAGAGCAGTCTACTACAGCAGG
AGAACTCGATGCTGAGGCAGCAGTTGGAAGCTATAGTCCAGGAGAACGGTTTGCTTAAACGAGCCGTGGTGACGCAGCAGAAGCGG
CAGAGGGAAACCGAAGATCAAAGCCAGGAGTTGCAGCGTTTGAGCAGATGGTTAGTCAGTACCAGGAGCAGCTGAGACTCTCGAGG
TCATAATTATGCTCTGACGCTTCATCTTAACAAGCGCAGCAGACAGTAGTCGATCTCGGGTCGTACCATCAGACGTGTCTATGTCG
CTTCGTAGAGTCGCCTTGAGATCCGCATCTCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568521 Ubiquitin system component Cue protein [Arabidopsis thaliana]7521e-077
AAK43955 unknown protein [Arabidopsis thaliana]7521e-077
XP_002868389 hypothetical protein ARALYDRAFT_493566 [Arabidopsis lyrata subsp. lyrata]7521e-077
XP_002325204 predicted protein [Populus trichocarpa]5021e-048
NP_001190418 Ubiquitin system component Cue protein [Arabidopsis thaliana]4608e-044

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8H1Q3 Putative uncharacterized protein At5g324407527e-078
Q94K99 Putative uncharacterized protein At5g324407527e-078
B9IMV5 Predicted protein5027e-049
B3SL84 At5g32440-like protein (Fragment)3924e-036
B3SL85 At5g32440-like protein (Fragment)3924e-036

Arabidopsis top hits (Blast detail)Scoree value
AT5G32440.1 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).7524e-080
AT1G80040.1 unknown protein3573e-034
AT5G32440.2 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3393e-032
AT1G80040.2 unknown protein2713e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members