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Information for unigene UN62452

FASTA Sequence
Unigene ID: UN62452Length: 701 SSR 
GTAAAAGTCCTAGAGGAGTCCACAGATTCTCTCTAGTGTTTCATTCACATCTTTTAAGTGCAGTGTGATCTTTACTTGTCCAAAAA
GAGCAAAACAATACCACTCATCAAACTCTCTTTGTTTACATGAAATTTGTTCTAACAAAAGCTGAATCCTTTCTAAATAAAAATCT
CCTTTCCTTGTCACCGCTTTCTCGATATGCAATCAGAGAATGTGTCAACGAGCTGCTCAGCTAAAGCTACCGAATCGTCCTGGAAA
GCATCAACGAATGTCTTGACAACATTTATCTCCTGAGCACTGGCCTTTAACTGATTCAGTGCTCACGTAGCGAGTAGGAGTAGCGT
TCTTCCTTTGTCTTTTCGAGTTTCTCTTAGTAGTTGCTGTTGTTGTTGATGAGTCTCTCTTTCTGTCTTGTTGATCTCCGGAGTTC
CCTCTGACAGGAGGCGGTGGGACTTTTTTTTTGCTCAGATACAGTATTCAAGAGGGTGTTGATGATCTGAGCTTTGGTCAAGTTCT
TGTATTTTCTTTCCTTGCCTAACTCTGCGCATAAGACCTGACGAATCTCCTTCTTCTTCTTCTTCTTGAAGGGTTACTTTGGTATC
TTGGAGGGATTCCAAAGCAGAAGAGCAAAGATCCTTCACCTTTGTCGCTGAGCCAAGCCTGTTTACGTTTCCTCTACACATTGCCG
ATGGGAGATCAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886257 predicted protein [Arabidopsis lyrata subsp. lyrata]1613e-009
XP_002325044 predicted protein [Populus trichocarpa]1407e-007
NP_194749 vernalization5/VIN3-like protein [Arabidopsis thaliana]1391e-006
NP_849471 vernalization5/VIN3-like protein [Arabidopsis thaliana]1391e-006
NP_179477 vernalization5/VIN3-like protein [Arabidopsis thaliana]1391e-006

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B9ILX8 Predicted protein (Fragment)1405e-007
B9DFL9 AT4G30200 protein (Fragment)1397e-007
O64617 Putative uncharacterized protein At2g188701397e-007
Q3E9U4 Putative uncharacterized protein At4g30200.31397e-007
Q8GUH6 At4g302001397e-007

Arabidopsis top hits (Blast detail)Scoree value
AT2G18870.1 VEL3 (VERNALIZATION5/VIN3-LIKE)1394e-009
AT4G30200.1 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.1394e-009
AT4G30200.3 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.1394e-009
AT4G30200.2 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.1394e-009
AT2G18880.1 VEL2 ((VERNALIZATION5/VIN3-LIKE))1332e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members