Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN62541

FASTA Sequence
Unigene ID: UN62541Length: 837 SSR 
GGAGAAGAAAAAAAAAGTTGGATATATGAAACGAAGAACATGGTGATGATGTGTGGTGTTTGTGTAGGTTTTAACTTAAGAAGCAC
ACAAGTAAACAAAAAAAATAAAAGAATTCACAACCATTTTCTCCAACTAGTTGATCTAAGCTCACCAGAGAACAACCTTGGAATGC
TCAATAAACTATTAACCCTAGTCAACCCTTCCAAAGCAGACCACTCTTCATCATCCTGTGCAACCGATATACACTCAGCAATTGTC
ATTGTCATCATCTTCGACTCAATCCCAACTCTTAGGTGCACTTTCCTCTTTAACCTGAACAATCTCATCCTCCTCCTCCTCCTTGT
TACTAATACTGACACTCTCTACAGAGTCTTCTTTGTGAGAATCCTTTGCTACATTGCTTGAATCTTGGAGAAAGAGGCAGACTACA
GTGCAGTCATCGTTCTTGGAAGTTGGATACTTGATTCTCCATGATCTAACAGCTGTGTCCACTAGAGCTCTAGCTGCTGTGCTTCG
ACTAGGAGCTGAAGCAATAACGTCCACAGCTTCTTTGTTTGACAACACATCCCATACCCCGTCGCTAGCAAGAATAATGAACTCAT
CTCCTTCGGTAAGGCGGCGGTAGTTGATGTCAGGGACCGAGATAAGACCGTAATCTTTGAGACAGAAGTCACCAAAAGCTCGAGCC
ATTGCTAAACCAGGTGAGTCGCTGTTTGGTAGCCATACACGAGCTACCTCAGGCTCATCTTGCACGCAAACACTCTGCCTTTACAT
TTTTGGATCTCGCTGATCACTTGGCAGTCTGGTTTAAGTCTATGGTAATTGTACAGCGACAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889260 phosphatase 2C family protein [Arabidopsis lyrata subsp. lyrata]6793e-069
NP_974180 putative protein phosphatase 2C 18 [Arabidopsis thaliana]6784e-069
NP_001031302 putative protein phosphatase 2C 18 [Arabidopsis thaliana]6784e-069
AAF68125 F20B17.6 [Arabidopsis thaliana]6784e-069
NP_178081 putative protein phosphatase 2C 18 [Arabidopsis thaliana]6784e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXZ4 Probable protein phosphatase 2C 186782e-070
Q9SA22 Probable protein phosphatase 2C 65912e-060
Q6ZKL8 Probable protein phosphatase 2C 665511e-055
Q9M8R7 Probable protein phosphatase 2C 335009e-050
Q9FG61 Probable protein phosphatase 2C 744712e-046

TrEMBL top hits (Blast detail)Scoree value
C5YJ78 Putative uncharacterized protein Sb07g0283005663e-056
B4FQ93 Putative uncharacterized protein5582e-055
B6U7X6 Catalytic/ protein phosphatase type 2C5475e-054
B9ST96 Protein phosphatase-2c, putative5441e-053
A5BDP5 Putative uncharacterized protein5403e-053

Arabidopsis top hits (Blast detail)Scoree value
AT1G79630.2 protein phosphatase 2C family protein / PP2C family protein6782e-071
AT1G79630.1 protein phosphatase 2C family protein / PP2C family protein6782e-071
AT1G79630.3 protein phosphatase 2C family protein / PP2C family protein6782e-071
AT1G16220.1 protein phosphatase 2C family protein / PP2C family protein5912e-061
AT3G02750.1 protein phosphatase 2C family protein / PP2C family protein5008e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members