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Information for unigene UN62611
| FASTA Sequence |
| Unigene ID: UN62611 | Length: 652 |
SSR | | CCTGCAACACTTTCTCCTCAAAGAAGCAAATGATTAAACATACGTATTTTCCAAAAGTTAAAAGAAGAATAAAACAAGACCTACTG
AGTAGTGAGTTCTGACTATTCCCCTGTCTCCTGTGTCCAAAACTAACACCTAAAAGAAGAACTCGGCTCTCTTTGTACATAGTAAC
TGCAAAACAACACAATATGGGACTTTCACAAGAACTAAAGCAAACGCAAAACCCAAAAGCCAAAAATGATTTGCCAGTGTGGGGCG
CAGTGGAGATATATATATATAGCCAAAGCGTGTCTCTCTCTTTTCTCAAAGCTTTGGCTGATTAAGGTGCACCTAAAGAATCTGTC
TCAACTGGTTGTTCAAAGCCTGATGAGTTGGTTGCTGAGCACCTTTCTCTTTCTCTTTCTCTCCCCGCTGCTGCTGCTTCAGCTGC
ATCCTCTGCTGCTTCTGCTTCTGCTTCGGTTTTCTTGGCAAACCGGCCTCCACTAGCCCTTGCCCTTCTCATCGCATGCTTGTGTC
TCGACTCATGAAGATACGGCTTTCTGTTGATGACTTTCCTTTCAAGCTCAGCCTTGGCACGTGCTCTCCTCCGCCTTAGAATTCCC
TCGTACTGTTTTGCATTCACATAAACAGGTTCTTGTGTCATGTCAAGCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568282 nuclear transcription factor Y subunit A-1 [Arabidopsis thaliana] | 373 | 6e-034 |
| NP_850811 nuclear transcription factor Y subunit A-1 [Arabidopsis thaliana] | 373 | 6e-034 |
| XP_002873581 predicted protein [Arabidopsis lyrata subsp. lyrata] | 365 | 5e-033 |
| ACU19709 unknown [Glycine max] | 293 | 1e-024 |
| BAD15086 CCAAT-box binding factor HAP2 homolog [Daucus carota] | 292 | 1e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LXV5 Nuclear transcription factor Y subunit A-1 | 373 | 3e-035 |
| Q945M9 Nuclear transcription factor Y subunit A-9 | 271 | 2e-023 |
| Q84JP1 Nuclear transcription factor Y subunit A-7 | 221 | 1e-017 |
| Q54S29 Nuclear transcription factor Y subunit alpha | 219 | 2e-017 |
| Q8VY64 Nuclear transcription factor Y subunit A-4 | 215 | 6e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGV8 AT5G12840 protein | 373 | 4e-034 |
| Q1ECD3 At5g12840 | 373 | 4e-034 |
| C6TD07 Putative uncharacterized protein | 293 | 8e-025 |
| Q76FX0 CCAAT-box binding factor HAP2 homolog | 292 | 1e-024 |
| A5BU97 Putative uncharacterized protein | 291 | 1e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G12840.1 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | 373 | 3e-036 |
| AT5G12840.2 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | 373 | 3e-036 |
| AT5G12840.4 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | 373 | 3e-036 |
| AT5G12840.3 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | 373 | 3e-036 |
| AT3G20910.1 NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9); specific transcriptional repressor/ transcription factor | 271 | 2e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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