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Information for unigene UN62723

FASTA Sequence
Unigene ID: UN62723Length: 586 SSR 
CCAAATACAAAGTTTTAACAAAAACAAATATACATAGCGGTATGAAGTTACACAACAATGATCCCAAAATACATAGTCGGACATGG
AAGACTTCCAAAAAAAAAAAAGAAACGGAAAACTTTCTTCTTCAAGTAAAATGCTGTTCATCACTACTACTGTTCACGTTGATCTC
TAAAAGCTCCTCGATAGGGTGTCTACAAATCGGACATTTATTCGACTGAAGCCTCAATTCTTTAGCACAGTCGCTACACATGCACA
AATGTCTACAAGGCAGCACAGCCGTGTCCTTAGCCTCAGTCATACAGATCACACATTCTTTACCCGAACCACCGTCCTCTAAACCC
GAGGATGCACCTTGAGTGGTCGATCCATACAACTCACGTAGTTCATATCGAACTCCTTCTATCCAAAGAATCTGCTTCACAACTTT
CACCTGGAAAGATCCATCGCTGTCTCTCTCAAGAACCGCTTGCGTGACTTGCTTATGAACTGATGATGATGATGATGGAGAGATCA
CCGTCTCAGCCGATATAACGAGCGGGTACACGTCTTCTTCTAAGGGTCTTGACAGATCGTCAAGAGCGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884561 hypothetical protein ARALYDRAFT_317476 [Arabidopsis lyrata subsp. lyrata]6835e-070
AAF30307 putative RING zinc finger protein [Arabidopsis thaliana]6665e-068
NP_566274 RING/U-box domain-containing protein [Arabidopsis thaliana]6665e-068
NP_197409 RING/U-box domain-containing protein [Arabidopsis thaliana]5358e-053
XP_002871858 hypothetical protein ARALYDRAFT_909929 [Arabidopsis lyrata subsp. lyrata]5303e-052

Swiss-Prot top hits (Blast detail)Scoree value
Q7ZUL9 Probable E3 ubiquitin-protein ligase MGRN12901e-025
Q6INH1 RING finger protein 1572872e-025
O60291 Probable E3 ubiquitin-protein ligase MGRN12854e-025
Q9D074 Probable E3 ubiquitin-protein ligase MGRN12845e-025
Q5XIQ4 Probable E3 ubiquitin-protein ligase MGRN12845e-025

TrEMBL top hits (Blast detail)Scoree value
Q8LA32 At3g061406664e-068
Q9M8K4 Putative RING zinc finger protein6664e-068
Q84ME1 At5g19080/T16G12_1205355e-053
Q8L7V9 AT5g19080/T16G12_1205258e-052
B9RTT7 Mahogunin, putative4334e-041

Arabidopsis top hits (Blast detail)Scoree value
AT3G06140.1 zinc finger (C3HC4-type RING finger) family protein6842e-072
AT5G19080.1 zinc finger (C3HC4-type RING finger) family protein5703e-059
AT3G09770.1 zinc finger (C3HC4-type RING finger) family protein3832e-037
AT3G53410.1 zinc finger (C3HC4-type RING finger) family protein3795e-037
AT5G03200.1 zinc finger (C3HC4-type RING finger) family protein3553e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members