Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN62835

FASTA Sequence
Unigene ID: UN62835Length: 646 SSR 
GCCTATATTTTGTACCTCTTTATTGAATAACATGAAAAAGGGGAGACATAAACTTTCAAAACAAACCATACAAGGTACCCTAATAA
GTCGATGATAAGACATCACAAAACTGCTACTGCAGATTAAAAAATAAAAAGACTATTACAAACTTAGTAGATTAATAAATATATTC
AAGAAAGAAGCCAGGCGAACAGCGCATTTTCCTCGTCGTTATCCAATGGTTCTCCAAAGTTCTCGCAATTACTTTTCCCGATCGTG
GCCTCATCATCACCGTCCAAAAGCCACGACACCATTGAATCAGAACCTTCTTTCTCATCGCAAATGTTATTGTCATTCCCTTGTTG
CCAAACACAGTCCCAATCGATAAACTCATCCGTGAACGCATTGTTGACTTGATGCTCATTGTTGAGAAATGACTCCATAGACGGAC
AAGACTGAAGACAGTCGAGATTCTCTTGGTTCAAAATCTCCGAAGACCCTTTGGCTTGTTCATAGTCTCCTAGATTATTCAACTCT
GCATTACCACCACACGATGTGAATACGTGGCTTGGATCTGATTCGTCCAACAAAAGATCGATGATGTCTTCATCAAAGGATGAAAC
TCCTTCATCGCCATCAGTGCTATTATTATTATTATTGTTGTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880304 hypothetical protein ARALYDRAFT_483923 [Arabidopsis lyrata subsp. lyrata]6236e-063
AAC83586 putative transcription factor [Arabidopsis thaliana]5976e-060
NP_182268 transcription factor MYB12 [Arabidopsis thaliana]5976e-060
ADZ98867 MYB domain protein 12 [Brassica rapa subsp. rapa]5752e-057
NP_191820 myb domain protein 11 [Arabidopsis thaliana]1828e-012

Swiss-Prot top hits (Blast detail)Scoree value
O22264 Transcription factor MYB125973e-061

TrEMBL top hits (Blast detail)Scoree value
Q6R078 MYB transcription factor1826e-012
Q9LZK4 Putative transcription factor MYB111826e-012
Q9ZTF2 Putative transcription factor (Fragment)1782e-011

Arabidopsis top hits (Blast detail)Scoree value
AT2G47460.1 MYB12 (MYB DOMAIN PROTEIN 12); DNA binding / transcription activator/ transcription factor5982e-062
AT3G62610.1 ATMYB11 (MYB DOMAIN PROTEIN 11); DNA binding / transcription factor1833e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members