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Information for unigene UN62856

FASTA Sequence
Unigene ID: UN62856Length: 714 SSR 
GGTGAGCTTTCAGTATATTCATTTGATACAAAACTTTTATGGTAATTGGTAAACACACACACACACACACACACACAAACGCCCTA
AAATAAGAAAACGATCGTGAGATCTAATTTAGCAAAACAAGGCAAACAAACAAGCAGACACAACCAAATCGTTCTTAAAAATCTCT
TGAAACTATACAATTCGGCTTACTCAAAATCAAAATCTCTCGTCTCAATTCACAACAACTAAATCCGAGCCGGCTCCTTTAAACCG
GACATTTGCATCAGCCAAGACTCTTCTAGTCTCCTCGTCTTCAGGTGTCTCCATCATCAACAACTCATAATCTTGAATCGCATGTT
GCCATTTCTCCAACTTCGCATAAGAATCTGCCCTGCGCCGCCTCGCCTTCCTGTACGATGGCTGGAGATTGAGAGCCAGTGTGCTA
TCTTCAACGGCTTTCTCGAACTGACCAAGCTTGAATCTTGAGGCCGCTCTGTTACAGAGCAAGAGAGCATTGCAAGGTCTTGCTCG
AGTCCTTCCGTGTAAACCACGCAAGCCGCTTCGAATTTGGACGCGTTGAATAGTAAATTGCCGGTGAGTCTCGCCGCAGCAACTGC
CCTCGCTTTTCTAGCCACTGCTTTTACTTCTTCGTTACTCGGATCTAGTCGAGACGCTTGCCTCGACGCTGTTACTGCATCTTCAA
ATCTTCCTGCTGCAATGTAGACCTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177936 tetratricopeptide repeat-containing protein [Arabidopsis thaliana]3908e-036
AAU05450 At1g78120 [Arabidopsis thaliana]3908e-036
XP_002889175 tetratricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata]3908e-036
XP_002284180 PREDICTED: hypothetical protein [Vitis vinifera]2832e-023
CBI19146 unnamed protein product [Vitis vinifera]2832e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q9MAH1 TPR repeat-containing thioredoxin TTL12255e-018
Q54IP0 DnaJ homolog subfamily C member 7 homolog1395e-008
Q99614 Tetratricopeptide repeat protein 11342e-007
Q32LM2 Small glutamine-rich tetratricopeptide repeat-containing protein alpha1323e-007
Q3ZBR5 Tetratricopeptide repeat protein 11323e-007

TrEMBL top hits (Blast detail)Scoree value
Q66GS5 At1g781203906e-036
Q9C9S0 Putative uncharacterized protein T11I11.63906e-036
B9H744 Predicted protein (Fragment)2742e-022
B9RJI4 Heat shock protein binding protein, putative2671e-021
B9HFH7 Predicted protein (Fragment)2607e-021

Arabidopsis top hits (Blast detail)Scoree value
AT1G78120.1 tetratricopeptide repeat (TPR)-containing protein3904e-038
AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein2552e-022
AT5G10090.1 tetratricopeptide repeat (TPR)-containing protein2327e-020
AT1G53300.1 TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1); binding2255e-019
AT3G58620.1 TTL4 (Tetratricopetide-repeat Thioredoxin-Like 4); binding2093e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members