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Information for unigene UN63203

FASTA Sequence
Unigene ID: UN63203Length: 552 SSR 
GTTCTTCAGTCACTTACATCTAGAGGATTTCGATGGGATGCTTCGTGGAGGAGAGAACCAGATAAGTGTAGATGATTGGAGAGCGC
ATACAGAGTACAATGGGTTCAGAGAAACCGACCGCCAAATAGACTGGTTCTGGAAGATTCTGAGGAAGATGACAGAGGAAGAACGG
AGGAGTGTGCTCTTCTTTTGGACATCGAGTAAGTTTATACCGGTGGAAGGGTTTAGAGGGTTGTCGTCTAAGCTTTATATCTACAG
GTTACATGAAGCTAATGATCGTCTTCCAACGTCTCACACTTGCTTTACCGTCTCTGTTTGCCAAAGTACCCGACGATGGGTCTCAT
GGAACAGCGACTAAGGTTCATCACTCAAGATCATGTCAGCTCCAGTTTCGGTAAATGGTGAATAAATTATCAAAGTGATCTCTCTC
TCTCTCTGATCTTTAGGTTCTTAGATTGGTGGGTTTGGTGTATATATTATTTATCTTTTAACTTTCTGCTTCTTTAACTTATGGAT
AAATAATTAATTTGATGGTAGGGAGAATGAAAAGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_192994 E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana]4962e-048
XP_002872661 hypothetical protein ARALYDRAFT_490058 [Arabidopsis lyrata subsp. lyrata]4962e-048
XP_002532714 conserved hypothetical protein [Ricinus communis]3815e-035
XP_002322526 predicted protein [Populus trichocarpa]3717e-034
ABD32996 HECT; Ubiquitin [Medicago truncatula]3619e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q9SU29 E3 ubiquitin-protein ligase UPL54961e-049
O13834 E3 ubiquitin-protein ligase ptr11932e-014
P39940 E3 ubiquitin-protein ligase RSP51895e-014
Q756G2 Probable E3 ubiquitin-protein ligase TOM11878e-014
O14326 E3 ubiquitin-protein ligase pub31832e-013

TrEMBL top hits (Blast detail)Scoree value
B9T395 Putative uncharacterized protein (Fragment)3813e-035
B9IH77 Predicted protein3715e-034
Q2HT48 HECT; Ubiquitin3617e-033
B8BCV1 Putative uncharacterized protein3563e-032
B9G492 Putative uncharacterized protein3563e-032

Arabidopsis top hits (Blast detail)Scoree value
AT4G12570.1 UPL5 (UBIQUITIN PROTEIN LIGASE 5); acid-amino acid ligase/ binding / ubiquitin-protein ligase4961e-050
AT1G55860.1 UPL1 (UBIQUITIN-PROTEIN LIGASE 1); ubiquitin-protein ligase1672e-012
AT1G70320.1 UPL2 (UBIQUITIN-PROTEIN LIGASE 2); ubiquitin-protein ligase1626e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members