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Information for unigene UN63265
| FASTA Sequence |
| Unigene ID: UN63265 | Length: 827 |
SSR | | GGAGAACTTCTCATAACTCCAATGTCCAAACCAATATAAACCCCATAGAGATAGAGACCAAAAACGAATACCCAATCTCAAATCTC
TCGAATTTATTTCAAAAGCTCGAATCTTTTAATTGCTTCAATGGGTGAGAAAGATTCAGAGACAGCTCCGATTTGGGGAAGAACAC
GACAGAGCGAGAGCAACAACAACAACAACAACATCCACCGAATGGATGTGGAATCGTCTGCTCTGTCTGAGCAACATCGATCTCAG
AACCGAAGTCGAGGAGGAGATTCTTACGAAGAACGAGGAAGAGGAGTTAAGGAGTTTCGGAGCTGGTTCTCTTGGCTTATCCCCTG
TTTCGTGATCGCTAACGTCGTCGTGTTCGTGATCACCATGTATGTCAACAACTGTCCGAAGAAGTCTGGAGACTGTTTCGCGGGTT
TCTTGGGTCGGTTCTCGTTTCAGAGTACAAACGAGAATCCTCTTCTGGGTCCTTCCTCTCTCACGTTAAGAACAATGGGTGGATTA
GATGTGAAGAAAGTGGTTAACGGAGATGAAGGATGGCGTCTACTTTCTTGCAACTGGTTACATGGAGGAGTTGTTCATTTGTTGGT
GAACATGTTGACTCTTTTGTTCATCGGTATGCGTATGGAACGTGAATTTGGTTTTATACGGATTGGGTTGCTTTATTTAATATCGG
GGTTTGGAGGAAGTATACTGTCAGCACTTTTCCTCCGCTCAACATCTCTGTGGGAGCATCTGGTGCTGTCTTTGGTTTACTTGGAG
ATGCTCTCTGAGATCTTTATCACTGGACATCTATACTAAAAGTTGTGACGATC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002877941 rhomboid family protein [Arabidopsis lyrata subsp. lyrata] | 922 | 2e-097 |
| NP_850698 RHOMBOID-like protein 4 [Arabidopsis thaliana] | 883 | 7e-093 |
| CAB88340 putative protein [Arabidopsis thaliana] | 737 | 6e-076 |
| XP_002309063 predicted protein [Populus trichocarpa] | 552 | 2e-054 |
| ACU22960 unknown [Glycine max] | 546 | 9e-054 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P54493 Rhomboid protease gluP | 122 | 6e-006 |
| Q6GV23 Rhomboid-like protease 5 | 120 | 1e-005 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M348 Putative uncharacterized protein F5K20_80 | 737 | 4e-076 |
| B9HBM6 Predicted protein | 552 | 1e-054 |
| C6TJ70 Putative uncharacterized protein | 546 | 6e-054 |
| A5AY17 Putative uncharacterized protein | 534 | 1e-052 |
| B9T4C7 KOM, putative | 523 | 3e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G53780.2 rhomboid family protein | 894 | 2e-096 |
| AT2G29050.1 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1) | 511 | 4e-052 |
| AT2G29050.2 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1) | 511 | 4e-052 |
| AT1G63120.1 ATRBL2 (Arabidopsis thaliana Rhomboid-like 2); serine-type endopeptidase | 495 | 3e-050 |
| AT1G12750.1 ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6) | 473 | 1e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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