Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN63348

FASTA Sequence
Unigene ID: UN63348Length: 460 SSR 
GGAACTCGCATCAACTTTTATCACTTCAATCTCTCTCTCTCTCGTATTTCACTGTGTGGGTTAAAAGTTTCTGTGAGAGATCGAAG
CTATGTCTCAGACCGTTGTTCTCAGAGTGGCTATGTCATGCGAGGGATGTGTTGGAGCTGTGAAAAGAGTCCTCGGCAAAATGGAA
GGCGTGGAGTCATTTGATGTGGATATAAAGGAGCAAAAGGTGACAGTGAAAGGCAATGTGCAGCCAGACGCCGTTTTGCAGACTGT
ATCAAAAACTGGAAAGAAATCGGCTTTCTGGGACTCAGAGGCTGAAACCGCCAGTCCTAAGGAGAAGCAGAGCCATCCCATATATA
TGAGACTGTTTTTTTCAATAAAAATCTATATGGGGATCCTTCTTCGTTTATTTGACTAGTGTCTGAACATTGCTCTGTGAACCAAC
CTTGTTTTAATTGAAGTAATGTGGTTAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564870 homolog of anti-oxidant 1 [Arabidopsis thaliana]3581e-032
XP_002888491 hypothetical protein ARALYDRAFT_475728 [Arabidopsis lyrata subsp. lyrata]3508e-032
AAT12488 copper chaperone [Populus alba x Populus tremula var. glandulosa]3392e-030
BAJ92563 predicted protein [Hordeum vulgare subsp. vulgare]3346e-030
BAJ88616 predicted protein [Hordeum vulgare subsp. vulgare]3346e-030

Swiss-Prot top hits (Blast detail)Scoree value
Q9TT99 Copper transport protein ATOX11339e-008
Q3T0E0 Copper transport protein ATOX11302e-007
Q9XT28 Copper transport protein ATOX11302e-007
O08997 Copper transport protein ATOX11275e-007
Q9WUC4 Copper transport protein ATOX11212e-006

TrEMBL top hits (Blast detail)Scoree value
Q94BT9 At1g66240/T6J19_63587e-033
A9PCL8 Putative uncharacterized protein3391e-030
A9PIL5 Putative uncharacterized protein3391e-030
Q6J338 Copper chaperone3391e-030
D4P094 Copper transport protein ATOX13301e-029

Arabidopsis top hits (Blast detail)Scoree value
AT1G66240.1 ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1); metal ion binding3588e-035
AT3G56240.1 CCH (COPPER CHAPERONE); copper chaperone3131e-029
AT1G66240.2 ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1); metal ion binding3069e-029
AT5G27690.1 heavy-metal-associated domain-containing protein1742e-013
AT5G17450.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related1689e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members