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Information for unigene UN63390
| FASTA Sequence |
| Unigene ID: UN63390 | Length: 625 |
SSR | | GAACGAAAGAGAGAGAGAGAGAGATATGTTGCTTCAGGCGGTACAGAATCGCAATGTTCCGCTGGCATCCTCCTCCGCCTCATATT
CTCGCCTCCCTCGCTCGAAATCACCACCCGTCGTAGTCTCCGTGGCTCCAATGAAGAAGAAGACGGCGGCAATAATCGTGTGCTCC
ATCTCCCAGGTGTATGGCTACGGAACGGTGGACTACGAGAGAAGGCCGGTTACCCAGTGGAATGCAATCTACAAGAAGATATCTCT
GATGGAGAAGCCGGAGCTGGGTGCGGCCTCCTTCTTCCTCACTCTCCCTGACAACTTTAAAGACCGCAGGGTCTATGGCTCCCTCC
TCAATGCCTATGTTAGGGCCAAGTCCAGAGACAAAGCTGAAGCCTTAATCGACACTATGAGGCAGAAAGGTTACGCCCTTCACCCT
CTTCCCTTCAACGTTATGATGACTCTCTACATGAACCTTAGGGAGTACGACAAAGTTGACGCTATGGTCTTCGAGATGAAGCAGAA
AGATATTCGTCTCGACATCTACTCCTACAACATCTGGCTCTCCTCCTGCTCCTCCGTTGACCAAATGGAGCTTGTCTACCAGCAGA
TGAAATCTGATGCTTCCATCAAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892022 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 519 | 6e-051 |
| NP_171717 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 515 | 2e-050 |
| AAM19786 At1g02150/T7I23.8 [Arabidopsis thaliana] | 515 | 2e-050 |
| XP_002327026 predicted protein [Populus trichocarpa] | 414 | 1e-038 |
| XP_002301239 predicted protein [Populus trichocarpa] | 405 | 1e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LPS6 Pentatricopeptide repeat-containing protein At1g02150 | 519 | 3e-052 |
| Q93WC5 Pentatricopeptide repeat-containing protein At4g01990, mitochondrial | 198 | 5e-015 |
| Q94B59 Pentatricopeptide repeat-containing protein At5g09450, mitochondrial | 193 | 2e-014 |
| O22714 Pentatricopeptide repeat-containing protein At1g60770 | 193 | 2e-014 |
| Q9C7F1 Putative pentatricopeptide repeat-containing protein At1g28020 | 181 | 5e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MV62 Predicted protein | 414 | 7e-039 |
| B9GP78 Predicted protein (Fragment) | 405 | 7e-038 |
| A5C6T5 Putative uncharacterized protein | 404 | 1e-037 |
| B9SKK8 Pentatricopeptide repeat-containing protein, putative | 388 | 7e-036 |
| A2XW27 Putative uncharacterized protein | 268 | 6e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G02150.1 pentatricopeptide (PPR) repeat-containing protein | 519 | 3e-053 |
| AT4G01990.1 pentatricopeptide (PPR) repeat-containing protein | 198 | 5e-016 |
| AT1G60770.1 pentatricopeptide (PPR) repeat-containing protein | 193 | 2e-015 |
| AT5G09450.1 pentatricopeptide (PPR) repeat-containing protein | 193 | 2e-015 |
| AT1G28020.1 pentatricopeptide (PPR) repeat-containing protein | 181 | 5e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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