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Information for unigene UN63434

FASTA Sequence
Unigene ID: UN63434Length: 804 SSR 
GGAATATTGGATCTTCCAGAGAATCTGGTAGAGGATGAGATCTTCTCTAGGCTGTCGATTTCATCTCTGAACTCAGTGAGATCTAC
CTGCAAAAAATGGAACATTTTACTTAAAAATCAGATCCTTTTGGGTGAAGCAGCAGAAAGAAGAAAGAAGCACTTCCTGATGCTGG
ACTCAAAGTCAAAGAGGATCTGTTTGATGAACTTGGATTTCCTCCGCAAAGACAAAGACGATGGCGAACCATCTATAAAACAAGTA
AGCCTACTTGTTCAAATCCAGATCTCCACGGTGTTTCAGTGTGATGGTTTGTTGCTATGCGTCCTTGAGGATGATAGCTCTAGGCT
CTTGGTATGGAATCCTTACTTAGGACAAACCACGTGGATCGAACCCAGACACAGTAGTTTCCATAGTTCAGACAGGTTTGCTCTCG
GATACGACAACAACAACAACAACAACAACCACAAGATCCTGAGGATCTCTTCCAACGAAGAACACGTTTTGGGGTTCGAACTCTAC
GAGTTTAGCTCGAGTTCTTGTAAGGTTCTTGATGATGTCACAAGCGAACACGTTTTATGGTCTCATGCACACGGCGGCGTCTCTTT
GAAGGGAAACACTTATTTTCGTGCGAGCCCTGTAGCTTCCTTCCTCTGTTTCGATTTCACAGCAGAGAGCTTTGGACCGCTTCTCC
CTCTCCCGCCGTCTCATTCTTACGATGGATTGCATTTTCTGTCTTTCTCTTGCGTAGAGAGAGCAGCAGCTCGCCGTACTGTATCA
ACACTGGAGACACGTCAGACGATCGAGATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179373 F-box protein [Arabidopsis thaliana]4374e-041
AAO37178 hypothetical protein [Arabidopsis thaliana]4374e-041
NP_188638 putative F-box protein [Arabidopsis thaliana]4105e-038
XP_002885502 hypothetical protein ARALYDRAFT_479757 [Arabidopsis lyrata subsp. lyrata]4096e-038
BAB02540 unnamed protein product [Arabidopsis thaliana]4052e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q9LID1 F-box/kelch-repeat protein At3g136805536e-056
Q8GRJ5 F-box/kelch-repeat protein At1g24800/At1g24881/At1g25055/At1g25143/At1g252114586e-045
Q9M0M7 Putative F-box protein At4g172004532e-044
Q84X17 F-box protein At2g178304372e-042
Q9FI48 Putative F-box protein At5g510004192e-040

TrEMBL top hits (Blast detail)Scoree value
Q058M6 At2g178304472e-042
A0MEV9 Putative uncharacterized protein (Fragment)3996e-037
Q9ZVI1 Putative uncharacterized protein At2g385903451e-030
Q84V15 At2g187803047e-026
Q9ZV41 Expressed protein3047e-026

Arabidopsis top hits (Blast detail)Scoree value
AT3G13680.1 F-box family protein5535e-057
AT1G24800.1 CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).4586e-046
AT1G25211.1 CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25055.1); Has 745 Blast hits to 722 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).4586e-046
AT1G24881.1 CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).4586e-046
AT1G25055.1 CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).4586e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members