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Information for unigene UN63441

FASTA Sequence
Unigene ID: UN63441Length: 785 SSR 
GGGAATCACAAACACGCAGTATTCCCTTTTACTCCTCCCCTAATTTCAAACCCTAGCTCTTCCTCCTCCTCCTCCTCCTCCTCAAG
AAATCGAGAGACAATGAAAGGAGGTAATTCAAAGGCCGACTCCAGAAACTCAAAGCTGTCTGTGAACAAGAAGCCAACGAAGGCGA
GCAAAGGAGCAGCTGCTGGTAAAGATCCTAACAAACCTAAGAGGCCTGCCAGTGCTTTCTTCGTTTTCATGGGGGACTTCCGTCAG
ACTTACAAGAAGGAGAATCCTAACAACAAATCTGTTGCTGCTGTTGGAAAAGCTGGTGGAGAGAAGTGGAAATCCTTGTCTGACTC
TGAGAAGGCTCCCTACGTAGCTAAGGCTGATAAGCGCAAGGTTGAGTATGAGAAGACCATGAAGGCCTACAACAAGAAGCTGGAGG
AAGGTCCAAAGGAGGACGAGGAATCTGATGATAAGTCAGTCTCTGACGTTAGTGAAGAGGAGGATGCTGATGATAAGAGTGATGAG
GAGGAAGACGATTGACTAACAAGTTGAAGTTGGCAGCATTATATAGAGGACGCTGCAACGATCTATCTCATGTTTTTATCTTCTTT
TCTTTCTCTTAAAATGTTAACGAGGCTCGTTTTATTTTTACTCATGTTTCTTTTTAGTAAGCTATCACTATCTCCCACTGATTCTG
ATTCTACTGGTAATGGAAAAATGTTTAGTTGCAATATCTTCATATTTGCAGCTAATTTTTTATAGCTCTATGTTTGTTATTATCAT
AGATCTGCAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF80615 F2D10.18 [Arabidopsis thaliana]5933e-059
BAJ33881 unnamed protein product [Thellungiella halophila]5862e-058
XP_002890402 hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp. lyrata]5782e-057
BAJ33706 unnamed protein product [Thellungiella halophila]5772e-057
NP_564123 high mobility group B2 protein [Arabidopsis thaliana]5763e-057

Swiss-Prot top hits (Blast detail)Scoree value
P26585 HMG1/2-like protein4603e-045
P40619 HMG1/2-like protein4272e-041
P40620 HMG1/2-like protein4164e-040
P40621 HMG1/2-like protein4058e-039
P27347 DNA-binding protein MNB1B3994e-038

TrEMBL top hits (Blast detail)Scoree value
Q9LM85 F2D10.185932e-059
O49596 HMG protein5762e-057
P93047 At1g20690/F2D10_155762e-057
A8MQZ3 Uncharacterized protein At1g20693.35672e-056
Q2V4M2 Putative uncharacterized protein At1g20693.25582e-055

Arabidopsis top hits (Blast detail)Scoree value
AT1G20696.1 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5868e-061
AT1G20693.1 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5761e-059
AT1G20693.3 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5742e-059
AT1G20693.2 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5643e-058
AT1G20696.3 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor5643e-058

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members