RadishBase

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Information for unigene UN63461

FASTA Sequence

Unigene ID: UN63461	Length: 669	SSR
GGGGGGATTCTAGCGTTTTCTCTAGCCGCACCTCCCTCCCACCCTCCCTCCATCTTCTCCCTCTTCTTCTGACCCTTACAACCTCC AATCCGTGCATCCACAACTCAGGAGCCAATCAAAAACATAACTTCTCATTCGAATGGAGTGCAACCGAGACGAGGCCTTAAGGGCA AAAGAAATAGCAGAGAACAAGTTCAAAACGAAAGACTTCGCAGGAGCCAAGAAGTTCGCATTGAAAGCTCAATCCCTCTTTCCAGA GATGGAAGGCGTTTCTCAGATGCTATCCACTTTCAACGTCTTCCTCGCCGCAGAGACCAGAGTTAACGGGGAAGTCGACTGGCACG GGATACTCGACGCAAACCCACGAGATGATAACGAGACGCTGAAGAAAAAGTACAGGAAGCTCGCTCTCGTGCTCCACCCGGATAAA AACAGCTCTGTTGGAGCTGATGGGGCTTTCAAGCATGTCTCCGAAGCTTGGAAGTTTTTGTCTGATAAGGACAAGAGAGGTGCTTA TGATCGTAAGAGGAGTTTGTACACTATGTATAACAAGGTTTCTGTCTCTTCTTCTAACAGCGGCTTCTGCAATTTCGCCAACGTTA GGCCGCCGCCGCCGCCGAGTCAGAAGAAGAACAATCCTACGCCGACACAGAAGAGCAATCCTCCGAA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_198554 chaperone DnaJ-domain containing protein [Arabidopsis thaliana]	678	3e-069
XP_002870522 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]	667	5e-068
XP_002523041 conserved hypothetical protein [Ricinus communis]	495	5e-048
XP_002303790 predicted protein [Populus trichocarpa]	491	1e-047
XP_002271091 PREDICTED: hypothetical protein [Vitis vinifera]	489	2e-047

Swiss-Prot top hits (Blast detail)	Score	e value
P35515 Chaperone protein dnaJ	155	6e-010
Q9UXR9 Chaperone protein dnaJ	153	1e-009
Q8TQR1 Chaperone protein dnaJ	151	2e-009
Q9QYI4 DnaJ homolog subfamily B member 12	150	2e-009
Q87VN8 Curved DNA-binding protein	149	3e-009

TrEMBL top hits (Blast detail)	Score	e value
Q9FHS7 AT5g37380/MNJ8_170	678	2e-069
B9SAM2 Putative uncharacterized protein	495	3e-048
B9GZP4 Predicted protein (Fragment)	491	9e-048
B9GML5 Predicted protein (Fragment)	480	2e-046
B8AQZ1 Putative uncharacterized protein	472	1e-045

Arabidopsis top hits (Blast detail)	Score	e value
AT5G37380.1 DNAJ heat shock N-terminal domain-containing protein	678	1e-071
AT5G37380.2 DNAJ heat shock N-terminal domain-containing protein	678	1e-071
AT5G37380.3 DNAJ heat shock N-terminal domain-containing protein	678	1e-071
AT5G37380.4 DNAJ heat shock N-terminal domain-containing protein	678	1e-071
AT5G37380.5 DNAJ heat shock N-terminal domain-containing protein	678	1e-071

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	1			100%

Unigene Members