Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN63472

FASTA Sequence
Unigene ID: UN63472Length: 501 SSR 
GGACGTCCTCGCTTTCTCTCTCGCCGCCGACGCTTACAACAATGGCGTCTCTCGCTCTCTCCGGCTCCTGCTCACTCGCCTTCCCA
CTCAAATCCCGCACCCACCTCCTCCCTCGTCCTCCTTCATCTCTCAATCTGCTGAAAAAACCTCTTCGATCTACCGAATCACGTTT
CTCCTCAGCGATATCTCCACTCACCAAGAGATCGACTCTCGTCAAAGCCTCTTCCACCGCCGCATGACAGGGATGGTGGTGGAAGG
AGGAGACATGGTGGTGGTGGTGGTAGCCCGAGACGGAGCAGAAGCCCTCCTGTTGTGAGAGAAGGTAGCGAGGACAACTGTACACC
AATTGATCTCATTCTTTTCTTTACTGATATGTAATCTCTTAGAATGGCTTTGAGATTAGATTGATAAGGAACAAGGATTTTTAAGA
GTTTGAGCTGGTGATTTTCTGCGATAATTTATTCTCTCGCACACATTTTGAGTTATAAGCAGATCTTAACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33726 unnamed protein product [Thellungiella halophila]2252e-017
NP_568283 dicarboxylate transporter 1 [Arabidopsis thaliana]2011e-014
NP_001119216 dicarboxylate transporter 1 [Arabidopsis thaliana]2011e-014
XP_002873582 hypothetical protein ARALYDRAFT_909232 [Arabidopsis lyrata subsp. lyrata]1993e-014

Swiss-Prot top hits (Blast detail)Scoree value
Q9FMY5 Splicing factor U2af small subunit B1222e-006

TrEMBL top hits (Blast detail)Scoree value
B3H4S6 Uncharacterized protein At5g12860.22012e-014
Q9LXV3 2-oxoglutarate/malate translocator-like protein2012e-014

Arabidopsis top hits (Blast detail)Scoree value
AT5G12860.1 DiT1 (dicarboxylate transporter 1); oxoglutarate:malate antiporter2012e-016
AT5G12860.2 DiT1 (dicarboxylate transporter 1); oxoglutarate:malate antiporter2012e-016
AT5G42820.2 U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding1222e-007
AT5G42820.1 U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding1222e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members