RadishBase

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Information for unigene UN63504

FASTA Sequence

Unigene ID: UN63504	Length: 731	SSR
GAATCTTTCCACTTCCTCTCTATCCCCAAAACCCTCTCTCTCTCTCTCGTCTGCGCGAACTGGAAGAAACAATGACTAACAACAAC AATCTGAACACGAAGATACGCTTCGAAGACGAAGCTGCACAAGGCTCCTCTGAAGCCGCCCAAGATGAATCCATGTCCGACGCCGC AGAGACCACCGATGACACCACCAGCGCCGATTACTACTTCGACTCCTACTCCCACTTCGGGATTCATGAAGAGATATTGAAGGATG TAGTGAGAACAAAGACTTATCAGAACGTAATTTACCAAAACAAGTTTCTCATCAAGGACAAAGTTGTTCTTGATGTTGGTGCTGGC ACGGGAATCTTATCTCTCTTCTGTGCCAAAGCTGGAGCTAAACATGTCTACGCTGTCGAATGTTCTCAAATGGCTGACATGGCTAA GGAGATTGTTAAAGCCAACGGATTCTCTGATGTTATAACGGTATTGAAAGGCAAGATTGAGGAGATAGAGCTTCCTACTCCTAAAG TGGATGTGATTATATCTGAATGGATGGGTTACTTTCTCTTGTTTGAAAACATGTTGGACAGTGTCCTTTACGCTCGCAACAAATGG CTTGTTGATGGTGGGGTGGTGTTGCCAGACAAAGCCTCTCTCTTTCTTACAGCTATAGAGGATTCAGAGTATAAAGAGACAAATTG AATTCTTGACAGTGTGTATGGTTTTGACATGTCATGCATCAGA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002869429 hypothetical protein ARALYDRAFT_491807 [Arabidopsis lyrata subsp. lyrata]	924	1e-097
NP_194680 protein arginine N-methyltransferase 1 [Arabidopsis thaliana]	918	5e-097
AAL36326 putative arginine methyltransferase pam1 [Arabidopsis thaliana]	918	5e-097
CAA07570 arginine methyltransferase [Arabidopsis thaliana]	912	2e-096
NP_179557 protein arginine N-methyltransferase 1 [Arabidopsis thaliana]	858	4e-090

Swiss-Prot top hits (Blast detail)	Score	e value
Q9SU94 Probable protein arginine N-methyltransferase 1.1	918	2e-098
O82210 Probable protein arginine N-methyltransferase 1.2	858	2e-091
A2Z0C0 Probable protein arginine N-methyltransferase 1	802	7e-085
Q0J2C6 Probable protein arginine N-methyltransferase 1	802	7e-085
Q28F07 Protein arginine N-methyltransferase 1	626	2e-064

TrEMBL top hits (Blast detail)	Score	e value
C6TMT8 Putative uncharacterized protein	842	2e-088
C6TDK1 Putative uncharacterized protein	837	9e-088
C5XAM2 Putative uncharacterized protein Sb02g022770	822	5e-086
B7FFB3 Putative uncharacterized protein	821	6e-086
A9NV48 Putative uncharacterized protein	815	3e-085

Arabidopsis top hits (Blast detail)	Score	e value
AT4G29510.1 PRMT11 (ARGININE METHYLTRANSFERASE 11); protein-arginine N-methyltransferase	918	2e-099
AT2G19670.1 PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A); protein-arginine N-methyltransferase	858	2e-092
AT3G20020.1 PRMT6 (PROTEIN ARGININE METHYLTRANSFERASE 6); methyltransferase	495	2e-050
AT1G04870.2 PRMT10; [myelin basic protein]-arginine N-methyltransferase/ histone-arginine N-methyltransferase/ methyltransferase/ protein-arginine omega-N asymmetric methyltransferase/ protein-arginine omega-N monomethyltransferase	382	3e-037
AT3G12270.1 PRMT3 (PROTEIN ARGININE METHYLTRANSFERASE 3); methyltransferase/ zinc ion binding	382	3e-037

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	1			100%

Unigene Members