Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN63810

FASTA Sequence
Unigene ID: UN63810Length: 412 SSR 
GGTAAATTAAGATCAAATTTGATGACAAAAAGATCTAACTGTTAAACAACGTAATAGAAGATAACAGCTTAAAGGAGAGAAAAGTA
TCCTTAAATTCAAAATCCTCGAACGCAAATGAAATGTGAAAGAAACCAAGTGTTTAGGTCTGAAAGATAGAAAAACTGAGACGATA
ATAAGCTTAAGAAGTAAACAGCTAAACATCATTACGAGGCAACGAAAGCTGTGGTGATCTACTCTTCGTCGTCCTCATCATCATCA
TCACCACCTGCTGCTCCGTTCAATGCCTTGACTCTCTCGATCAACTTATTCTTCCTTTCCTCATAGGTCAACTTCTTCAAATTGTA
CCTCTTGTGTGCCTTGGGGGGGTTTCACGGTCTTCTTAGGGTTGGGGTCAGCACGGATAGCAGCATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870764 hypothetical protein ARALYDRAFT_916328 [Arabidopsis lyrata subsp. lyrata]2102e-015
AAM64753 ribosomal protein, putative [Arabidopsis thaliana]2073e-015
NP_198790 60S ribosomal protein L5-2 [Arabidopsis thaliana]2056e-015
NP_566767 60S ribosomal protein L5-1 [Arabidopsis thaliana]2056e-015
BAD94104 ribosomal protein [Arabidopsis thaliana]2056e-015

Swiss-Prot top hits (Blast detail)Scoree value
Q8LBI1 60S ribosomal protein L5-12052e-016
P49227 60S ribosomal protein L5-22052e-016
P93779 60S ribosomal protein L5 (Fragment)1901e-014
Q6UNT2 60S ribosomal protein L51802e-013
A2WXX3 60S ribosomal protein L5-11622e-011

TrEMBL top hits (Blast detail)Scoree value
B9DHP6 AT3G25520 protein (Fragment)2054e-015
Q56X31 Ribosomal protein2054e-015
Q38HU5 Putative uncharacterized protein1875e-013
B7FJX5 Putative uncharacterized protein1713e-011
B6THG9 60S ribosomal protein L5-11688e-011

Arabidopsis top hits (Blast detail)Scoree value
AT3G25520.1 ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosome2063e-017
AT5G39740.1 60S ribosomal protein L5 (RPL5B)2063e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members