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Information for unigene UN64108
| FASTA Sequence |
| Unigene ID: UN64108 | Length: 520 |
SSR | | GTTTTGCTCAGCTGCTTCAACGGCTGTCTATGTCTACTTATACTCCATCTATTACTACTACGTAAAGACCAAGATGTCCGGATTCT
TCCAGACAAGCTTCTACTTTGGATACACCATGATGTTCTGCCTTGGCCTTGGAATCCTTTGCGGAGCTGTTGGATTCTTGGGATCA
AATCTGTTTGTAAGGAGAATCTATAGAAACATAAAGTGCGACTAGATGATACATCGAAAAGGAGGAAAAACATCCAATGTAGAAGA
AAGCTTCTTATGGGGTTTACATATATTATATAAACACAGTAGAGAGGGAAATTAAGATGGAGGAAGTTTGGAGCATATATATATTC
TTCAGGGATGGCTTATGTTTCTTCTTCTTCTTCTTAGTTCTCCCTTTTTGGTACGTGAATTGTTCTCTTTAGATTAGAAACGAGTG
GGTGTAATATACTAAACTACTGCCTGTAATTTTTCTCTATTCCTTTTTGTGTTTTACTTCACTTTCACTTTATTAAATCTTTCTAG
ATTT
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| GenBank top hits (Blast detail) | Score | e value |
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| AAB65482 endomembrane protein EMP70 precusor isolog; 68664-64364 [Arabidopsis thaliana] | 370 | 7e-034 |
| NP_563881 transmembrane nine 1 [Arabidopsis thaliana] | 370 | 7e-034 |
| AAL07091 putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] | 370 | 7e-034 |
| BAF01745 putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] | 370 | 7e-034 |
| XP_002889842 hypothetical protein ARALYDRAFT_471233 [Arabidopsis lyrata subsp. lyrata] | 370 | 7e-034 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9HD45 Transmembrane 9 superfamily member 3 | 268 | 3e-023 |
| Q9ET30 Transmembrane 9 superfamily member 3 | 268 | 3e-023 |
| Q54ZW0 Putative phagocytic receptor 1b | 198 | 4e-015 |
| Q9Y819 Transmembrane 9 superfamily protein C1105.08 | 153 | 6e-010 |
| P58021 Transmembrane 9 superfamily member 2 | 142 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| O04091 Endomembrane protein EMP70 precusor isolog; 68664-64364 | 370 | 5e-034 |
| Q0WMB1 Putative endomembrane protein EMP70 precusor isolog (Fragment) | 370 | 5e-034 |
| Q93ZV4 Putative endomembrane protein EMP70 precusor isolog (Fragment) | 370 | 5e-034 |
| Q940G0 At1g10950/T19D16_13 | 370 | 5e-034 |
| B9SXF5 Endomembrane protein emp70, putative | 367 | 1e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G10950.1 endomembrane protein 70, putative | 371 | 3e-036 |
| AT1G14670.1 endomembrane protein 70, putative | 213 | 7e-018 |
| AT2G01970.1 endomembrane protein 70, putative | 213 | 7e-018 |
| AT5G37310.1 LOCATED IN: integral to membrane, Golgi apparatus, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: endomembrane protein 70, putative (TAIR:AT1G14670.1); Has 1019 Blast hits to 986 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 148; Plants - 242; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). | 212 | 9e-018 |
| AT3G13772.1 endomembrane protein 70, putative | 146 | 4e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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