 |
Information for unigene UN64760
| FASTA Sequence |
| Unigene ID: UN64760 | Length: 583 |
SSR | | CCTGTAAAGCTCTTTTATATGTTTCAACAACAACAACAAAAGCAAGGTTCTCACTCACCATAACAAAAGTAAATAGTTTAATGTAA
TCTGATGAGTGAAGATTTAATAAGACAAAACAACAATAGGATATAATGTCTGTTGTCTGGTGGTGGCATTAGTATGGGCGGTACCT
CCAGTCTGATCTTGATGGTCTTGCGTTCGGAACTCCATATCCCCAATCGTCCAAGCTCATGGCTCCTCCATACATTCGACCAAAAG
TGCGCATTGGACCACCTCCAGCGTAACCACCAAAATGTTCAGGACGAGAAGAAGAAAAAAAACTTCCTCCACCACCACCAGCGCCG
CTAGGTCCACCAGCTTCATCAAGAGGTGTCGCTGAATCTATTGCTACCTCTTGTCCACAGATTTCATGAGATCTCCTGGCTACACG
ATCCGCAACACCGTTCTCAGCAAAGGTAACGAATCCAAAACCTCTATGTCCACTTCTCTTTGGATCCTTTGGAATATACGCATCTT
GAATACGACCAAATCTACCGAAGTAGTCACGGAGATCATCAACGGATGCTTCTTGAGGAAGGCGTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866967 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] | 599 | 3e-060 |
| NP_568011 RNA recognition motif-containing protein [Arabidopsis thaliana] | 593 | 1e-059 |
| CAB16795 RNA-binding like protein [Arabidopsis thaliana] | 511 | 5e-050 |
| ACJ85509 unknown [Medicago truncatula] | 459 | 5e-044 |
| XP_002310138 predicted protein [Populus trichocarpa] | 426 | 3e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9VVE5 RNA-binding protein Musashi homolog Rbp6 | 147 | 4e-009 |
| P48809 Heterogeneous nuclear ribonucleoprotein 27C | 146 | 5e-009 |
| Q99383 Nuclear polyadenylated RNA-binding protein 4 | 140 | 2e-008 |
| O43347 RNA-binding protein Musashi homolog 1 | 137 | 6e-008 |
| Q96DH6 RNA-binding protein Musashi homolog 2 | 137 | 6e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94AC3 AT4g36960/C7A10_400 | 593 | 1e-059 |
| O23189 RNA-binding like protein | 511 | 3e-050 |
| B7FL75 Putative uncharacterized protein | 459 | 3e-044 |
| B9HHC2 Predicted protein | 426 | 2e-040 |
| B9H6G5 Predicted protein | 424 | 4e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G36960.1 RNA recognition motif (RRM)-containing protein | 627 | 8e-066 |
| AT4G36960.2 RNA recognition motif (RRM)-containing protein | 627 | 8e-066 |
| AT5G47620.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 148 | 3e-010 |
| AT5G47620.2 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 148 | 3e-010 |
| AT5G40490.1 RNA recognition motif (RRM)-containing protein | 145 | 7e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
