RadishBase

| | | |

Information for unigene UN64850

FASTA Sequence

Unigene ID: UN64850	Length: 639	SSR
AACTGAAACTCTCTTCAATCAACAAACCAATCTTAAGTTTCGCATTCTTTCTTCAGATACAATAAACCACATTAATACATAACTCG CAAACAAAGCATGACTATGTTTCTGTCTGCGTCAGAATCTTTGTCTAGGAACATACAAGACGACGGCTTTGGCACCTGCAAGAGGG AACCAATGCCTTCGGAGACATAAACGTATGGCTCTCGGTGAATCTCTCTGATCAAACAACAAAACTGAGAGCTACCCTTTTGTAAG GGTAAGGAAATTTAAAAGTTTCTAGGTTCGTGGGCTCTCGGACAAACAACAGCTAGTTCTTTGTTCTATGAAACGAGTTTCGCTGG AGACGAACCAAAGCTGCTGCTGCTGCTGCTTTCTCCATTAGTTGTTACTTCGGATTGAGCTGAGGAGTTCAGGTAGCGCTCCATTG CTGAACTCTCCTGAGATATTTAACTGCACCCACAAGGCTTTGGAAACAAGGTATCCGACGAAAAGAACACCGAGCCATAGAGGATT TCTTAAGGGAGTCATAAATTCATTAAATCCAAGAACGACCAATGCAAGGATTGCCCATGGAGGTGGCAACCAGTTGTTATTCCGTC GGTTAGCTTCCTGTGCAGAAATAGCCTGAGTAACGGT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002884994 hypothetical protein ARALYDRAFT_478791 [Arabidopsis lyrata subsp. lyrata]	381	7e-035
NP_188003 Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis thaliana]	379	1e-034
NP_974308 Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis thaliana]	379	1e-034
BAF02124 root hair defective 3 [Arabidopsis thaliana]	379	1e-034
XP_002327435 predicted protein [Populus trichocarpa]	355	7e-032

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
P93042 Putative uncharacterized protein At3g13870	379	8e-035
Q0WL83 Root hair defective 3 (Fragment)	379	8e-035
Q3EB66 Putative uncharacterized protein At3g13870.2	379	8e-035
B9MWS5 Predicted protein	355	5e-032
B9SN36 Protein SEY1, putative	336	8e-030

Arabidopsis top hits (Blast detail)	Score	e value
AT3G13870.2 RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding	379	6e-037
AT3G13870.1 RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding	379	6e-037
AT1G72960.1 root hair defective 3 GTP-binding (RHD3) family protein	342	1e-032
AT5G45160.1 root hair defective 3 GTP-binding (RHD3) family protein	277	4e-025

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	1			100%

Unigene Members