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Information for unigene UN65057
| FASTA Sequence |
| Unigene ID: UN65057 | Length: 770 |
SSR | | GGAGACTCCATAACGGTAAAAAGAATATCTTTTGCCCTTTTCTCTCTCTCTCCCTCTCCCTCCCTCTTTCTTCTCCTCGCTCTGTG
CGTGTGTGTGTGTGTGTTCGGCCGTTTTGGGAAATTGATTAGATAATGGGTGTGGGAGGAAAGTTCTGGGATTTGGTGAGACCATA
TGGTCGAAACGAAGGTAGTGATTATCTGAGAGAGAAACGGGTGGCCGTTGATCTTTCCTTCTGGATCATTCAGAATGAAACTGCCG
TCAAGGGTTTTGCCCTTAAACCTCACCTCAGGCTCACTTTCTTCCGTACTATCAATCTCTTCTCCAAGTTTGGAGCGTACCCTGTA
TTCGTGGTTGATGGAACACCTTCACCCTTGAAATCCCAAACCAGAATCTCTAGGTTTTACCGATCTTCCGGAATCGATACGTCCAG
TCTCCAAGAGGGCCTAGTCTCCGTTGAGAGAAATAAGCAGTTTTGTGAATGGGTTAGCGAATGTGTGGAGCTACTTAAATTGCTCG
GTATCCCTGTTCTGAAAGCGAATGGTGAAGCTGAAGCTCTCTGTGCTCAGCTCAATAGCCATGGTTTTGTTGATGCCTGCATTACT
CCTGATAGTGATGCTTTCCTCTTTGGTGCTTTCTCCGTTATCAAATCCATCAAGCCTAACTCCACTGAGCCATTCGAGTGCTACCA
TATGTCAGATATCGAAGCTGGTCTCGGTCTGAAGCGGAGACACTTGATAGCCATCTCTCTTTTGATTGGTAACGACTTTGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889348 hypothetical protein ARALYDRAFT_311256 [Arabidopsis lyrata subsp. lyrata] | 942 | 9e-100 |
| AAF76467 Contains similarity to excision repair protein ERCC5 from Homo sapiens gi|1082359 and contains XPG N-terminal PF|00752 and XPG I-region PF|00867 domains [Arabidopsis thaliana] | 934 | 8e-099 |
| Q9LPD2 RecName: Full=Flap endonuclease GEN-like 1 | 934 | 8e-099 |
| NP_171691 5'-3' exonuclease-like protein [Arabidopsis thaliana] | 934 | 8e-099 |
| NP_001184887 5'-3' exonuclease-like protein [Arabidopsis thaliana] | 918 | 6e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LPD2 Flap endonuclease GEN-like 1 | 934 | 4e-100 |
| Q64MA3 Flap endonuclease GEN-like 1 | 695 | 2e-072 |
| Q17RS7 Flap endonuclease GEN homolog 1 | 330 | 4e-030 |
| Q8BMI4 Flap endonuclease GEN homolog 1 | 329 | 5e-030 |
| Q9VRJ0 Flap endonuclease GEN | 224 | 8e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RDJ8 DNA binding protein, putative | 868 | 2e-091 |
| A2Q3P8 Helix-hairpin-helix motif, class 2 | 845 | 1e-088 |
| A6MCZ6 DNA repair protein | 714 | 2e-073 |
| A2Z386 Putative uncharacterized protein | 696 | 2e-071 |
| B7E8Q8 Putative uncharacterized protein | 695 | 3e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G01880.1 DNA repair protein, putative | 934 | 3e-101 |
| AT3G48900.2 DNA binding / catalytic/ chromatin binding / nuclease | 257 | 1e-022 |
| AT3G28030.1 UVH3 (ULTRAVIOLET HYPERSENSITIVE 3); DNA binding / catalytic/ endonuclease/ nuclease/ single-stranded DNA binding | 205 | 1e-016 |
| AT3G48900.1 DNA binding / catalytic/ chromatin binding / nuclease | 190 | 6e-015 |
| AT5G26680.1 endonuclease, putative | 119 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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