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Information for unigene UN65083
| FASTA Sequence |
| Unigene ID: UN65083 | Length: 603 |
SSR | | GGAGAAACAAGACATTATTGTCATTAACTAGATAGCAATGTTCATATTGTTGCTAGGGTCTCTCTCTCTCTTTTCACAGGTAAATC
AGCTGCATTTTTACTACTAAGCAACTCCACAAGTTCAGCTTTCTTCCACAGCGTCTTCCTCAACCTTTTCATCTAGAAACTCATCA
TCATCTGATAAAACATCTAACGTAACCTCCTCCTCCTCCTCCTCTTCTTGGTGTGAGTCTAACTGCAGCTCTGACTCTGGCTCCAG
AATAGCTGTCACAGGGCCATGTTCTGAATCAAAGTCAGATTCATCATGTTTCTCGTACTCAGACACAACCTCAGGCGTCTTCACCC
TCGCCCCACAATAACGTGCCCTAAACTCAGCCTCGGTCAAGTCCGCAAACTTGTTGTCGGTTAGCTTAGAGGACAAGTCGAGGGAG
TTGTGGGAGTCTATATACCGGAGATTAGTCTTGTAAATCTGAAAGCGTCGCAACCACTCCTCTTTTCCTCCGTATACGACGCCGTG
GGTTTGACACCACTTCTCGAACCGTTCCCTCAAGGCGGTTTCTCTTTCACGGTCTGTTTCACCAGAAATCGCTCGGCAAACAAAGG
G
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563764 cysteine proteinase-like protein [Arabidopsis thaliana] | 216 | 8e-016 |
| XP_002889596 hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp. lyrata] | 216 | 8e-016 |
| XP_002525147 cysteine protease, putative [Ricinus communis] | 189 | 1e-012 |
| XP_002275891 PREDICTED: hypothetical protein [Vitis vinifera] | 177 | 3e-011 |
| CBI21941 unnamed protein product [Vitis vinifera] | 177 | 3e-011 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P43297 Cysteine proteinase RD21a | 146 | 5e-009 |
| P25803 Vignain | 144 | 9e-009 |
| Q75JC9 Uncharacterized protein DDB_G0271670 | 130 | 4e-007 |
| Q9LM66 Xylem cysteine proteinase 2 | 130 | 4e-007 |
| P87179 Cell wall integrity and stress response component 1 | 129 | 5e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LNC1 F9P14.12 protein | 216 | 6e-016 |
| B9SGM8 Cysteine protease, putative | 189 | 8e-013 |
| B6TLC8 Putative uncharacterized protein | 171 | 9e-011 |
| B9RYC1 Cysteine protease, putative | 171 | 9e-011 |
| B2LSD2 Mucunain | 167 | 3e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06260.1 cysteine proteinase, putative | 216 | 4e-018 |
| AT1G47128.1 RD21 (responsive to dehydration 21); cysteine-type endopeptidase/ cysteine-type peptidase | 146 | 5e-010 |
| AT1G06190.1 ATP binding / ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 145 | 7e-010 |
| AT5G43060.1 cysteine proteinase, putative / thiol protease, putative | 143 | 1e-009 |
| AT4G23520.1 cysteine proteinase, putative | 134 | 1e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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