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Information for unigene UN65113

FASTA Sequence
Unigene ID: UN65113Length: 723 SSR 
CGTTTGGGGTAGTAAATCAGAGAAGGAGTCATTTTAAATTTAAGCTTCTGCGTCTCCTTTGTGAAAGGAGGAGAGAGAGAGAGAGA
AAGTCAACGGCCATGGCTGGTCGTAGAGACAGAACCCAACAGCTCCGTGGATCTCGAATTGCGATCGCCATCCTCATCGGTATCAT
CATCGGCTGCGTTTGCGCCGTTCTCTTCCCCAACGGCTTCTTCAACTCGAGCTCCTCTCTTACTGTAAATGAACGCCTCCAGGTTG
GATCATCGTCATGTGAATCACCCGCACGTATCAAGATGCTGAAATCAGACTTTGCATCTCTCTCAGAGAAGAACGCAGATCTGAAG
AAGCAGGTCAGGGAGCTAACGGAGAAGCTGCGTTTAGCTGAGCAAGGATCAGACAACGCGAGAAAACAGTTTCTATCTTTAGGACC
AAAGATCAAGCCTGGTCCTTTCGGAACCGTCAAGAGCCTTAGAACCGACCCAACCATCCTCCCCGACGAATCCGTAAACCCGAGAC
TAGCAAAGATTCTAGACGACATCGCAGTCGATAAAGAGGTGATCGTGGCGCTCGTAAACTCGAACGTGAAAGCGATGCTGGAGGTT
CAGATCGCCAGCGTGAAGAGACTGGGCATCACTAACTACCTGGTTGTCGCGTTGGACGATTACATTGAGAATTTCTGTAATCGAAC
GACGCCGCTTATACAAGAGGGATCCGGACAAGACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893043 hypothetical protein ARALYDRAFT_472163 [Arabidopsis lyrata subsp. lyrata]8371e-087
NP_564082 Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]8253e-086
NP_565102 Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]7161e-073
AAM63606 unknown [Arabidopsis thaliana]7133e-073
XP_002889008 hypothetical protein ARALYDRAFT_476650 [Arabidopsis lyrata subsp. lyrata]7062e-072

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LN62 At1g193608252e-086
Q9C9Q5 At1g75110/F9E10_47169e-074
Q8LCK7 Putative uncharacterized protein7132e-073
B9GP37 Predicted protein6281e-063
B9R7R0 Putative uncharacterized protein6244e-063

Arabidopsis top hits (Blast detail)Scoree value
AT1G19360.1 LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: RRA2 (REDUCED RESIDUAL ARABINOSE 2) (TAIR:AT1G75110.1); Has 165 Blast hits to 162 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).8251e-088
AT1G75110.1 RRA2 (REDUCED RESIDUAL ARABINOSE 2)7166e-076
AT1G75120.1 RRA1 (REDUCED RESIDUAL ARABINOSE 1)5437e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members