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Information for unigene UN65142
| FASTA Sequence |
| Unigene ID: UN65142 | Length: 628 |
SSR | | GAGAAACAATGATTCTCCGGAGGCTTGTTCTGTCTGCAACAACATCGAACTCAAATCTCAGAAGAAGAAGCAAACCATTCTCTACA
TCTCCCATACGTCTCCTCTCATCATCATCATCATCATCATCATCATCTCCCGAACCTTCGCAACAGCTCGCGAGGCTAACCCACAA
GGACTGGCTAGCCCCCAACGAGGTTTTAAAAATCTTCGAAAACATCAAAGACCCAACCTCCCTCATCCCCGCTTACACACACTACT
CCAAACGCAAAGACTACCAACCCACCGAGCCTCTCTACTCCCTCCTCATCACCAAGCTCGGACACGCCAAGATGTTCGACGAAATC
GAACGCCTCACCAAAACCCTAACCCTCGAAACAAAACGGTGCCGTTTCTCCGAAGACTTCTTCTACAGTTTAATGAAAGTCTACGG
AAACTCCGCCGGGAGAATCAATAAAGCGATCGAGACACTCTTCTCCATGCCCGAGTTCGGATGCTGGCCGAGCGTCAAAAGCTTCA
ATTTTATACTGAATCTCCTCGTCAAGGCGAAGCTCTTCGACGAGATTCATAAGATCTTCGTGAGGGCTCCGGATCTCGGCGTTGAG
ATCGACGCTTGCTGCTTGAACATACT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_188076 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 762 | 4e-079 |
| XP_002882884 predicted protein [Arabidopsis lyrata subsp. lyrata] | 746 | 3e-077 |
| XP_002267684 PREDICTED: hypothetical protein [Vitis vinifera] | 531 | 3e-052 |
| CAN60667 hypothetical protein VITISV_028261 [Vitis vinifera] | 529 | 4e-052 |
| XP_002298921 predicted protein [Populus trichocarpa] | 516 | 1e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LUD6 Pentatricopeptide repeat-containing protein At3g14580, mitochondrial | 762 | 2e-080 |
| Q17RH7 Putative protein TPRXL | 134 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5AVV9 Putative uncharacterized protein | 529 | 3e-052 |
| B9GGX7 Predicted protein (Fragment) | 516 | 1e-050 |
| B9S6Q4 Pentatricopeptide repeat-containing protein, putative | 436 | 2e-041 |
| C5YG35 Putative uncharacterized protein Sb06g028710 | 426 | 3e-040 |
| B9FCJ4 Os04g0618050 protein | 424 | 5e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14580.1 pentatricopeptide (PPR) repeat-containing protein | 762 | 2e-081 |
| AT3G13150.1 pentatricopeptide (PPR) repeat-containing protein | 135 | 1e-008 |
| AT3G48810.1 pentatricopeptide (PPR) repeat-containing protein | 133 | 2e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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