 |
Information for unigene UN65215
| FASTA Sequence |
| Unigene ID: UN65215 | Length: 732 |
SSR | | GAATAGTTAATACATCTCTCTCTCTCTCTGTTCTGTCTAGATCTTGCGGTAGATGAGAAACATTTTGCTTCTACTGTTCGTGTAAA
AATCACCATCCCAAGTTTCTGCTTTTTGACTTCCTTTAGCTCTAGAAATGGCTTCTGCTCTTCGAAGCTTCTCAAGAAGGAGAAAT
ATTTCTCCAAAATGGTTCTGCTGCAAGACCTCATCCTCTAGCCCTGTTGTTCTTCATCATGACAAAGATTATAATACTAAGCCCAC
TTTCTCGGATTCAAGTCTTCTTCTTGCTCGTAGCTTTCACAGGCAAGTGTTCCTCTTTGAAGACAGAAAGAAAACGTCTTTTTCTC
AACAACCATTAGGTGCTTCTTCTGGAGTACTGCTATGTAGACACATCTCCTCCTCATCCAGCAAACCAGAAGAATGGAGCATAAAG
ATTGATGCCTTTGGAGATATTGTTAAGGGACTTGTCCCTGAGAAATCTGTGGAAGCAATGGCCGCCACTACTATAGATGGATGTAG
TGCTGCAGCAGTAAAAAACGTCTCTTTCCCTGTGAACTGTGTGCATTATCTGATTAATGGAATCCATGACCTTACTGGTTTCAACT
GGTCGATGTCAATTATTCTTACGGCTTTTCTGGTCAATGAACTCATGTCTCCAGTCTCTATGCTGATTCAGAGACAAGCTGCGGAG
TTATTATTTTGGGGTATGAGCATCCAGAAGGGATGAGATTGATA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_850455 OxaA/YidC-like membrane insertion protein [Arabidopsis thaliana] | 390 | 8e-036 |
| XP_002888047 hypothetical protein ARALYDRAFT_893288 [Arabidopsis lyrata subsp. lyrata] | 293 | 1e-024 |
| XP_002882063 hypothetical protein ARALYDRAFT_483800 [Arabidopsis lyrata subsp. lyrata] | 269 | 9e-022 |
| XP_002530480 cytochrome oxidase biogenesis protein, putative [Ricinus communis] | 159 | 5e-009 |
| XP_002509958 cytochrome oxidase biogenesis protein, putative [Ricinus communis] | 149 | 7e-008 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E7E7 Putative uncharacterized protein At2g46455.1 | 390 | 6e-036 |
| B9SWW1 Cytochrome oxidase biogenesis protein, putative | 159 | 4e-009 |
| B9RCS4 Cytochrome oxidase biogenesis protein, putative | 149 | 5e-008 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G46455.1 INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion, integral to membrane; CONTAINS InterPro DOMAIN/s: 60 kDa inner membrane insertion protein (InterPro:IPR001708); BEST Arabidopsis thaliana protein match is: OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) (TAIR:AT2G46470.1); Has 21 Blast hits to 21 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 390 | 4e-038 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
