RadishBase

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Information for unigene UN65269

FASTA Sequence

Unigene ID: UN65269	Length: 505	SSR
GGATCTCCTCCCGCTTTGCCTCTTTTAGAACGCACAAGACAGAGAGAGAAAGAGAAGAGAAGAGAGACTCATAAGCCTCTCTCTCT CTCCCTCTTTCTCTTTATATATTTTTATAAATACACATTCTCAGATTCTTTGCCTCCTCTCCTCTCCTCGACGTCGTTGATTTGAG AAGAAGAAAAGTTTGGATTTTTTTATATATAATTTTTAAAGAAGAAGAAAGAAGATGGGTTACATAGGAGCACATGGTGTAGCAGC TCTGCATAGACACAAATACAGTGGTGTGGATCACTCTTATCTCGCCAAATACGTTCTCCAACCCTTTTGGAATCGTTTTGTCAAAA TCTTCCCTCTCTGGATGCCACCCAACATGATAACACTTACGGGGTTCATGTTTCTCATCATATCTGCGCTGTTAGGCTATGTCTAC TCCCCTCAGTTGAATTCTCCTCCTCCTCGTTGGGTTCACTTGGTACATGGACTAGTTCACTTTTTGTATCAGACA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_172813 ethanolaminephosphotransferase [Arabidopsis thaliana]	460	2e-044
AAB53764 aminoalcoholphosphotransferase [Brassica rapa subsp. campestris]	460	2e-044
XP_002892758 hypothetical protein ARALYDRAFT_471515 [Arabidopsis lyrata subsp. lyrata]	460	2e-044
NP_189186 aminoalcoholphosphotransferase [Arabidopsis thaliana]	459	3e-044
XP_002875262 hypothetical protein ARALYDRAFT_484318 [Arabidopsis lyrata subsp. lyrata]	459	3e-044

Swiss-Prot top hits (Blast detail)	Score	e value
P22140 Choline/ethanolaminephosphotransferase 1	237	1e-019
P17898 Cholinephosphotransferase 1	219	1e-017
Q550W1 Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 3	199	3e-015
Q5NV96 Ethanolaminephosphotransferase 1	189	4e-014
Q54XM0 Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein 2	184	1e-013

TrEMBL top hits (Blast detail)	Score	e value
O04178 Aminoalcoholphosphotransferase	460	2e-044
O82567 Aminoalcoholphosphotransferase	460	2e-044
O82568 AT3g25585/MWL2_21	459	2e-044
B9RLB3 Diacylglycerol Cholinephosphotransferase	442	2e-042
Q8W1E9 Aminoalcoholphosphotransferase	442	2e-042

Arabidopsis top hits (Blast detail)	Score	e value
AT1G13560.1 AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	460	1e-046
AT3G25585.2 AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	459	2e-046
AT3G25585.1 AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	459	2e-046
AT3G25585.4 AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	459	2e-046
AT1G13560.2 AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups	196	6e-016

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	1			100%

Unigene Members