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Information for unigene UN65271
| FASTA Sequence |
| Unigene ID: UN65271 | Length: 703 |
SSR | | GGAGAGAGAGAGAGAGGTCTAGTAAAAATGGCGATGGCCATGGCTCTTCGAAGACTTTCTTCTTCAGTCGACAAACCCATTCGTCC
TCTTATCAGATCAACTTCATGCTTCATGTCATCTCTGCCTAGTGAAGCTGTGGATGACAAGGAGAGATCTCGTGTCACTTGGCCAA
AACAGCTTAACGCATCATTGGAGGAGGTTGATCCTGAGATTGCTGACATCATTGAGCTTGAGAAAGCTAGACAATGGAAGGGACTT
GAACTCATTCCATCTGAGAATTTCACATCTGTCTCGGTGATGCAAGCTGTTGGCTCTGTGATGACTAACAAGTACAGTGAAGGGTA
CCCTGGCGCTAGATACTATGGAGGAAACGAGTACATAGACATGGCTGAAACTTTATGCCAAAAGCGTGCTCTTGAAGCTTTCCGGT
TAGACCCTGAAAAGTGGGGAGTGAATGTTCAACCTCTGTCTGGATCTCCTGCTAACTTCCATGTCTACACTGCATTGCTAAAGCCT
CATGATTTTCTACAGAAAGGGTGTTAAGGAAGTTAACAAACAAGGGAAAGAGGTTTTGTATGATTTTGAAGACAAGATCAATCAAG
CTGTCCTCCCTGGTCTTCAAGTGGTCCACACAACCACACTATTACAGGACTAGCTGTTGCTTTAAAACAGCAACTACTTCAGAGTA
CAAAGCATACAAGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195506 glycine hydroxymethyltransferase [Arabidopsis thaliana] | 829 | 1e-086 |
| AAL06913 AT4g37930/F20D10_50 [Arabidopsis thaliana] | 829 | 1e-086 |
| XP_002866922 hypothetical protein ARALYDRAFT_490821 [Arabidopsis lyrata subsp. lyrata] | 829 | 1e-086 |
| BAJ33788 unnamed protein product [Thellungiella halophila] | 818 | 2e-085 |
| ACM45955 serine hydroxymethyltransferase 5 [Glycine max] | 758 | 2e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZJ5 Serine hydroxymethyltransferase, mitochondrial | 829 | 5e-088 |
| P49357 Serine hydroxymethyltransferase 1, mitochondrial | 727 | 3e-076 |
| P34899 Serine hydroxymethyltransferase, mitochondrial | 724 | 7e-076 |
| P50433 Serine hydroxymethyltransferase, mitochondrial | 721 | 2e-075 |
| P49358 Serine hydroxymethyltransferase 2, mitochondrial | 692 | 3e-072 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6ZJZ0 Serine hydroxymethyltransferase | 758 | 1e-078 |
| B9SMK7 Serine hydroxymethyltransferase | 757 | 1e-078 |
| A9YWS0 Serine hydroxymethyltransferase | 746 | 3e-077 |
| B7FLU1 Putative uncharacterized protein | 746 | 3e-077 |
| A9PIN8 Serine hydroxymethyltransferase | 711 | 3e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G37930.1 SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/ poly(U) binding | 829 | 4e-089 |
| AT5G26780.1 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 668 | 2e-070 |
| AT5G26780.3 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 668 | 2e-070 |
| AT5G26780.2 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 668 | 2e-070 |
| AT4G32520.1 SHM3 (SERINE HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | 441 | 4e-044 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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