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Information for unigene UN65414
| FASTA Sequence |
| Unigene ID: UN65414 | Length: 689 |
SSR | | GATGCATTATTTTCCAACCATGGGTGGTTGAAACTTTCAACATACGGTTGTGTGTTCTTATCTACTCATTCTTGTTAATAATTGTC
TCTCACTGGGGGGCTCAGCTTCTGATTTTTTTCTTCTGAATCTCTCTCTCTCTCTTTGCTGCAATATAATGGGAGGTTTATTCTCG
ATCTCCATGCCATGTGACCAAGTGGTGGATCAAGTCTCTCAATGTCTCTGCACTCAGGGGAGTTATATATACAGCCTTTCAGAGAA
TCTAGCTGCTCTGCAGAGAGGCATAGAAGTGCTCAAGGCAAAACGAGATGATGTGCAAAGAAGAGTTTGCCGAGAAGAGTTTACAG
GACGTCGTGAAAGGCTTTCTCTGGTCCAGGTATGGCTTACTAACGTCCTCAACACCGAGAACAAATTCAATGATCTGCTTAGCTCT
AATGACATTGAGTTTCAAAGGCTGTGTCTCTGTGGGCTCTTGATGTAGTCCTGATATCAACTGATGATATTCTCATATCAACTGTC
AACATTGAGGATGTGGTCATTAAACCAGAAGCTGAAGCAATATCTAAAACCGTAGCTGTACCAGAAGCCAATCAGATGGTCAACCC
AACACCTTACCAAACCAGTCAAGGCGCTAACCAAGATATATGTGCACTAAAAATGCCATATCTTATAAACCAGGAGGGTTTTAATC
A
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACP30550 disease resistance protein [Brassica rapa subsp. pekinensis] | 378 | 2e-034 |
| ACP30579 disease resistance protein [Brassica rapa subsp. pekinensis] | 377 | 2e-034 |
| AAL65637 RFL1 [Arabidopsis lyrata] | 374 | 5e-034 |
| XP_002889921 hypothetical protein ARALYDRAFT_888542 [Arabidopsis lyrata subsp. lyrata] | 374 | 5e-034 |
| NP_172686 disease resistance protein RPS5 [Arabidopsis thaliana] | 363 | 1e-032 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O64973 Disease resistance protein RPS5 | 363 | 5e-034 |
| Q8L3R3 Disease resistance protein RFL1 | 340 | 2e-031 |
| P60838 Probable disease resistance protein At1g12280 | 317 | 1e-028 |
| O82484 Putative disease resistance protein At4g10780 | 229 | 2e-018 |
| P60839 Probable disease resistance protein At1g12290 | 228 | 2e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D1GEA8 Disease resistance protein | 378 | 1e-034 |
| D1GED7 Disease resistance protein | 377 | 2e-034 |
| Q8LGP0 RFL1 | 374 | 4e-034 |
| Q56YM8 Disease resistance protein | 363 | 7e-033 |
| B1PBY6 Putative uncharacterized protein | 358 | 3e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12220.1 RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding | 363 | 5e-035 |
| AT1G12210.1 RFL1 (RPS5-like 1); ATP binding / protein binding | 340 | 2e-032 |
| AT1G12280.1 disease resistance protein (CC-NBS-LRR class), putative | 317 | 1e-029 |
| AT4G10780.1 disease resistance protein (CC-NBS-LRR class), putative | 229 | 2e-019 |
| AT1G12290.1 disease resistance protein (CC-NBS-LRR class), putative | 228 | 2e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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