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Information for unigene UN65429
| FASTA Sequence |
| Unigene ID: UN65429 | Length: 679 |
SSR | | GGACAGAGAGATACACGACGACAAGTATCAACCAACACAAACTCATATCTCTCTCTCTCTCTCTCTTAACGTTATCTCTTCACCTT
CTCAGTCATTTATGTGTGTTCAAAGAGAAAGCCAGAGATAGTGCTGCTAGGATAAAGAGAGCTATTTTCTAGAGATTGCTGATATC
TCCAATGGCGAGCTGTGTTTTATCAGAATGTGGTATCAGACCTCTCCCAAGGTTCTACCCTAAACCCACAAACTCTTTTCCCTCTA
ACCCATCACCCACTCTCAAACTTAACCCACCGGTTACACCTCTTCCTTCTCTCAACACCCGAAGTTGGATCTTCCCTAGAACAAGA
AACTGGGCGCTGAATGTGGCCACGCCATTGACAACTCTCGAGACACAACCCGAGGAAGAAGAAGACGCGAGGAGGTTCGACCCTGG
TGCGCCTCCTCCTTTCAACTTGGCGGACATTAGAGCAGCCATACCCAAGCACTGTTGGGTCAAGAATCCATGGAAGTCGATGGGTT
ACGTTGTCAGAGATGTAGCTATCGTCTTTGGATTGGCTGCTGTTGCTGCTTACTTCAACAGCTGGCTTCTCTGGCCTCTCTACTGG
TTTGCTCAAGGGACCATGTTTTGGGCTCTCTTTGTTCTTGGCCATGACTGTGGACATGGTAGCTTCTCTAATGATCT
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| GenBank top hits (Blast detail) | Score | e value |
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| AAW78909 fatty acid desaturase [Brassica rapa subsp. pekinensis] | 805 | 5e-084 |
| ACS26171 chloroplast fatty acid desaturase 8 [Brassica napus] | 791 | 2e-082 |
| ACS26172 chloroplast fatty acid desaturase 8 [Brassica napus] | 781 | 3e-081 |
| XP_002871171 hypothetical protein ARALYDRAFT_487353 [Arabidopsis lyrata subsp. lyrata] | 741 | 1e-076 |
| NP_196177 omega-3 fatty acid desaturase (delta-15 desaturase) [Arabidopsis thaliana] | 739 | 2e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48622 Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic | 744 | 3e-078 |
| P46310 Omega-3 fatty acid desaturase, chloroplastic | 616 | 2e-063 |
| P48620 Omega-3 fatty acid desaturase, chloroplastic | 588 | 4e-060 |
| P48618 Omega-3 fatty acid desaturase, chloroplastic (Fragment) | 514 | 1e-051 |
| P48621 Omega-3 fatty acid desaturase, chloroplastic | 449 | 5e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5EFF3 Fatty acid desaturase | 805 | 4e-084 |
| C5J3R1 Chloroplast fatty acid desaturase 8 | 791 | 2e-082 |
| C5J3R2 Chloroplast fatty acid desaturase 8 | 781 | 2e-081 |
| Q8W4M9 Temperature-sensitive omega-3 fatty acid desaturase, chloroplast | 730 | 2e-075 |
| A1E437 Omega-3 fatty acid desaturase | 720 | 3e-074 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G05580.1 FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase | 744 | 3e-079 |
| AT3G11170.1 FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase | 616 | 2e-064 |
| AT2G29980.1 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 370 | 7e-036 |
| AT2G29980.2 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 370 | 7e-036 |
| AT4G30950.1 FAD6 (FATTY ACID DESATURASE 6); omega-6 fatty acid desaturase | 117 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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