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Information for unigene UN65448
| FASTA Sequence |
| Unigene ID: UN65448 | Length: 730 |
SSR | | GGGGGCGGCTGTTATTTCATAAAAGCATCTCTCTTTCTGTGGACGAAACTGAACCTTAAGAGAAAACGGAACCATAGAGCACCACT
AGCCTAGAGAGAGAGAGAGCTAGCTCGATCGTCTGTGAAAGGAAATGGCTTTGAAGCTTAACCCTTTGGCATCTACTCAGCCCTAC
AGATTCCCTTCCTCGGCTCGTCCGCCAATCCCTACTTTCAGATCTCCCAAGCTCCTCTGCCTCGCTTCTTCTTCTTCTTCTCCTGC
TCTTGGCGCCAAGGAGGTTGAGAGTTTGAAGAAGCCATTCACTCCACCTAAGGAGGTACACGTCCAAGTTTTGCACTCCATGCCGC
CCCAGAAGATCGAGATCTTCAAATCCATGGAAGACTGGGCCGAGCAGAACCTCTTAATTCATCTCAAAGACGTGGAAAAGTCTTGG
CAACCCCAAGATTTTCTACCCGACCCTGCATCCGATGGGTTTGAAGATCAGGTGAAAGAGCTAAGAGAGAGGGCTAGGGAGCTCCC
TGATGACTACTTTGTTGTTTTGGTGGGAGACATGATCACAGAAGAAGCGCTTCCGACTTATCAAACTATGCTGAACACTTTGGATG
GAGTGAGAGATGAAACTGGCGCTAGCCCCACTTCATGGGCCGTTTGGACAAGAGCTTGGACTGCAGAAGAGAACCGACACGGTGAT
CTTTTGAATAAGTATCTTTACTTGTCTGGCCGTGTTGACATG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_181899 acyl-[acyl-carrier-protein] desaturase [Arabidopsis thaliana] | 973 | 2e-103 |
| AAD40245 plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase [Brassica juncea] | 973 | 2e-103 |
| AAK82496 At2g43710/F18O19.18 [Arabidopsis thaliana] | 973 | 2e-103 |
| XP_002880063 hypothetical protein ARALYDRAFT_903770 [Arabidopsis lyrata subsp. lyrata] | 971 | 4e-103 |
| BAJ34062 unnamed protein product [Thellungiella halophila] | 970 | 5e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| P29108 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 969 | 3e-104 |
| Q01771 Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic | 943 | 3e-101 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 807 | 2e-085 |
| Q42807 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 778 | 4e-082 |
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 768 | 6e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O22832 Acyl-[acyl-carrier-protein] desaturase | 973 | 1e-103 |
| Q94AE9 Acyl-[acyl-carrier-protein] desaturase | 973 | 1e-103 |
| Q9XQR7 Acyl-[acyl-carrier-protein] desaturase | 973 | 1e-103 |
| Q39355 Acyl-[acyl-carrier-protein] desaturase | 968 | 5e-103 |
| Q3EBH3 Acyl-[acyl-carrier-protein] desaturase | 968 | 5e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 973 | 9e-106 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 968 | 3e-105 |
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 690 | 6e-073 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 660 | 2e-069 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 614 | 4e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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