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Information for unigene UN65478
| FASTA Sequence |
| Unigene ID: UN65478 | Length: 720 |
SSR | | ATCCAGTTCTTCTTCTTCTTCTTGCTCATTTTTTTTTCTCCAGGAGTTGAGCTTCGTTCTTGATTAAGATATCTTTAGTTTCAGTG
AAGAATTGAAGAGAGCTCAAGAAAGGGACAACAGAGGAAGGAGTCATATAGTTTCACTTATTCTTGTTTGTCTTGAGTTTTGTAAA
TTAGCTTTTATCAAATGGAGTTAGGATCTTCAATTGGGCCGTGCTTCAAGTCAGCAAACCCTCCTGTACTAACCTCTAGGAACACC
AATCTCACGTTGAGAAGGAGAAGTCAAAGATTCTCATTCAGCGTCTCTGCTGTTTCGTATAAGGACTTCGCCGAGTCTGCTCTGCA
AGAAACCAGGAAAAGGCTCGTTCTTGAGCCTTCACCTCTCCAGGAAAGGTACAGCAGCATGACTGGACTTGATGGGAAAACCCAAC
TTGAAATGCTTGCCTTCAAGTCTCCAAAGATTAGACTGTTGCGGAGCATGGCCATTGAGAACGAGACGATGCAGGTTTTTGACTTT
GCTGGTTTCATGGAGCCTGAGTATGACACACCTATATTCTGTGCTAACTTCTTCACATCTGCCAACACCAACATAGTGGTGCTGGA
CCTGAATCCTTTGCATCAGTCGACTGACCAGACAGATTACCAAGACAGTATTACAAAACATAATGTCCATATACACAAATATGATG
AGATTTCCCATGGGAGGTAAACTAACTGTGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882607 hypothetical protein ARALYDRAFT_478229 [Arabidopsis lyrata subsp. lyrata] | 654 | 2e-066 |
| NP_566344 phytochromobilin:ferredoxin oxidoreductase [Arabidopsis thaliana] | 651 | 4e-066 |
| AAM67180 unknown [Arabidopsis thaliana] | 632 | 7e-064 |
| NP_850996 phytochromobilin:ferredoxin oxidoreductase [Arabidopsis thaliana] | 631 | 9e-064 |
| NP_974264 phytochromobilin:ferredoxin oxidoreductase [Arabidopsis thaliana] | 406 | 1e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SR43 Phytochromobilin:ferredoxin oxidoreductase, chloroplastic | 651 | 2e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E7L0 Putative uncharacterized protein At3g09150.3 | 406 | 8e-038 |
| B9GIF8 Predicted protein (Fragment) | 392 | 3e-036 |
| B9HP19 Predicted protein (Fragment) | 390 | 6e-036 |
| B9RSJ6 Phytochromobilin:ferredoxin oxidoreductase, chloroplast, putative | 380 | 8e-035 |
| Q588D6 Phytochromobilin synthase | 357 | 4e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G09150.2 HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | 651 | 2e-068 |
| AT3G09150.1 HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | 631 | 4e-066 |
| AT3G09150.3 HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | 406 | 5e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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