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Information for unigene UN65501

FASTA Sequence
Unigene ID: UN65501Length: 624 SSR 
GGAGCTCTCTCTCTCTTGGAGATCAAGATCTATTACCTCTACATCTGTGTGTGTTCGCCTGAATCTAAAGGTTTAACCTTTGATTG
AAGTTTGTGAAGCCCTTCAGGGAGATGCCAAATTAGAGAGAGAGAGAGAGAGATGGCGAGACAAGCGGGGAAACAGAGTTACGGTC
GGCTTGTGTTAGTATCATGCCTCGCGCTTCTAGCTTTAGGACTTGTTGCCGACTTCCTTTGGGCTTCATCTCATCGCTTCTCCCTT
GCCCCCGGGACTTATCTTCCCTCTCCCGTGATCGAAAAACTCCCTCCTGATTCCAATAAGAAGAAGGATAAAGAAAGGAAGCTTTC
CGCAACGTTTCAAGATTTTGATGCTCCTCAGCTACAATGGGAGAAGATGAAAGCTGCACCTGTGCCTCGTCTTGATGGAGCTGCTA
TTCAGATTAGGAATCTTCTCTACGTCTTTGCTGGTTACGGCAACATTAATCTTGTGCATTCGCATGTTGATATATACAATTTTGTG
GATAATAAGTGGGGGGGGAGGTTTGATATGCCTAAAGAGATGGCTCATTCTCATTTAGGGATGGTAACTGATGGGCGGTTCATCTA
CATTGTCACTGGTCAGTATGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883284 hypothetical protein ARALYDRAFT_318850 [Arabidopsis lyrata subsp. lyrata]6433e-065
AAG52629 unknown protein; 27363-23366 [Arabidopsis thaliana]6192e-062
NP_175565 kelch-like motif-containing protein [Arabidopsis thaliana]6111e-061
NP_001053143 Os04g0487100 [Oryza sativa Japonica Group]4991e-048
EAY94614 hypothetical protein OsI_16391 [Oryza sativa Indica Group]4991e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q9LK31 Kelch repeat-containing protein At3g272204002e-038

TrEMBL top hits (Blast detail)Scoree value
Q9C8K6 Putative uncharacterized protein F5D21.246191e-062
Q84VX7 At1g515406111e-061
A2XUV4 Putative uncharacterized protein4999e-049
A3AV20 Putative uncharacterized protein4999e-049
Q25A88 H0302E05.10 protein4999e-049

Arabidopsis top hits (Blast detail)Scoree value
AT1G51540.1 INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: kelch repeat-containing protein (TAIR:AT3G27220.1); Has 1571 Blast hits to 1365 proteins in 151 species: Archae - 11; Bacteria - 200; Metazoa - 1128; Fungi - 24; Plants - 53; Viruses - 41; Other Eukaryotes - 114 (source: NCBI BLink).6117e-064
AT3G27220.1 kelch repeat-containing protein4002e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members