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Information for unigene UN65564

FASTA Sequence
Unigene ID: UN65564Length: 766 SSR 
GGGTTTAGCAAAGCCAAAGTCCAAGGGAAACTCTCTCTCTCTCTCTTTCTCTCTTTGAATTTATTTGAGATGTAATGATCGGTTAA
ACTTATAATTTCGAAAAGAAAAAAAGGTCTTGTCTGGTTCCCTCTGGGTGTAATTGCTGTTTTGATGATGGGATTTTGCATCTGTC
CGTTGGAGTTTCCGGCGAGATTACTATGGAGTACAAGCTTCTTTCGTCATAAGATCATCATCTTCCAATTCCCTTTAGCTTCATCG
GTCTTTCTCTTTACTTTGAACCCAATCCTCTCTCTCTGTTTCTCTGTTTTCTTTGTATTTTTCTTCTCTGGTTAAATCGAGATGGA
ATCCAATTCGTTTTTCTTCGATCCTTCTGCCGCCCATGGCAACAACATGTTCTTCTTCCAAGGAGCAAGATCGATGATGAACATGG
AGGAATCATCAAAGCGAAGGCCCTTCTTTTGCTCCCACGAGGATCTTTACGACGACGATGACTATAACGACGACCACATACCCGAC
AAAAAACGTCGCCTCACTACCCAACAGGTGCATCTGCTGGAGAAAAGCTTCGAGACCGAGAACAAGCTGGAGCCAGAGCGCAAAAC
TGAGCTTGCTAAGAAGCTTGGTCTCCACCCAAGCAAGTTGCTGTCTGGTTTCAAAACCGACGTGCTCGTTGGAAACAAAGCAGCTC
GAGAGAGACTTCAGTCTCTCAGTCTCTACGACAACTCCTCTCTACTACGACTCCATCCTCACGACACATCTCTCAGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_186796 homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]4142e-038
BAJ33940 unnamed protein product [Thellungiella halophila]3747e-034
XP_002882180 homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp. lyrata]3739e-034
CAP16664 homeodomain leucine zipper protein [Solanum lycopersicum]3423e-030
XP_002278872 PREDICTED: hypothetical protein [Vitis vinifera]3423e-030

Swiss-Prot top hits (Blast detail)Scoree value
Q02283 Homeobox-leucine zipper protein HAT54147e-040
A2X980 Homeobox-leucine zipper protein HOX162552e-021
Q6YWR4 Homeobox-leucine zipper protein HOX162552e-021
Q9XH36 Homeobox-leucine zipper protein HOX52248e-018
Q6ZA74 Homeobox-leucine zipper protein HOX52248e-018

TrEMBL top hits (Blast detail)Scoree value
B6GVA3 Homeodomain leucine zipper protein3422e-030
B9RUU7 Homeobox protein, putative3135e-027
C6T8D2 Putative uncharacterized protein3101e-026
B3IX27 Transcription factor Homeobox3021e-025
Q8W1K4 Homeodomain leucine zipper protein CPHB-52742e-022

Arabidopsis top hits (Blast detail)Scoree value
AT3G01470.1 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor4146e-041
AT3G01220.1 ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20); DNA binding / transcription factor1621e-011
AT1G26960.1 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23); DNA binding / transcription factor1565e-011
AT4G40060.1 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16); sequence-specific DNA binding / transcription activator/ transcription factor1557e-011
AT1G69780.1 ATHB13; DNA binding / sequence-specific DNA binding / transcription factor1522e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

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