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Information for unigene UN65696
| FASTA Sequence |
| Unigene ID: UN65696 | Length: 433 |
SSR | | GTCGTTCACGGTCCAACATCCGTTTATTCCGGTTATTACAAACTGGCTTTCTTAAGTTAATCAGGAGCTATTTCTCCGGTAGTGTT
TTAGATATTTTCGTTTACAGACTTTACATCCTCAGTGACATTACATATGTTCATACTCTCTCTCTCTTATTATCTGCTTACGATTT
TGGATCCAAAGTCTCGAGACCATCATCACGGTCTGTTAAAGCGTAAACCACTGCTGTTCTGCATGGTGTGTAGACCATGAAAGAGG
AGGGTCGTACGTCATAAGAGCCCTCAAATGTGAAATACTCTGACTTGGGATCGAGCCTGCCGAATCCACCGAACAGAGGACCGTCC
GAATCCAATACGATCTTGTATTTGCCTGGCTTGGAGCAACCAATGCGGTAATCAAAGTAGCTGCTGGTCCAGTGGAAGTTGAAGAC
GAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871050 1, 4-alpha-glucan branching enzyme protein soform SBE2.2 precursor [Arabidopsis lyrata subsp. lyrata] | 374 | 1e-034 |
| BAC42378 putative 1,4-alpha-glucan branching enzyme protein soform SBE2.2 [Arabidopsis thaliana] | 370 | 4e-034 |
| AAB03100 starch branching enzyme class II [Arabidopsis thaliana] | 370 | 4e-034 |
| NP_195985 1,4-alpha-glucan branching enzyme [Arabidopsis thaliana] | 370 | 4e-034 |
| AAY89377 starch branching enzyme 2 [Nicotiana langsdorffii x Nicotiana sanderae] | 351 | 7e-032 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q08047 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic | 267 | 2e-023 |
| Q6EAS5 1,4-alpha-glucan-branching enzyme | 195 | 5e-015 |
| Q9D6Y9 1,4-alpha-glucan-branching enzyme | 195 | 5e-015 |
| Q04446 1,4-alpha-glucan-branching enzyme | 193 | 9e-015 |
| P32775 1,4-alpha-glucan-branching enzyme | 188 | 3e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q42531 Starch branching enzyme class II (Fragment) | 370 | 3e-034 |
| Q8GYC4 Putative 1,4-alpha-glucan branching enzyme protein soform SBE2.2 | 370 | 3e-034 |
| Q9LZS3 1, 4-alpha-glucan branching enzyme protein soform SBE2.2 | 370 | 3e-034 |
| Q1L5W5 Starch branching enzyme 2 (Fragment) | 351 | 4e-032 |
| Q9XGA7 Starch branching enzyme II (Fragment) | 349 | 8e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G03650.1 SBE2.2 (starch branching enzyme 2.2); 1,4-alpha-glucan branching enzyme | 370 | 3e-036 |
| AT2G36390.1 SBE2.1 (starch branching enzyme 2.1); 1,4-alpha-glucan branching enzyme | 331 | 1e-031 |
| AT3G20440.1 alpha-amylase/ catalytic/ cation binding | 118 | 5e-007 |
| AT3G20440.2 alpha-amylase/ catalytic/ cation binding | 118 | 5e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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