Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN65726

FASTA Sequence
Unigene ID: UN65726Length: 810 SSR 
GAACCAAACAAACTATTTCTTTTTAAGAACTGCCATTTTTTTTTATGTTTACCAACAAAAAATGAGTTGTGAGATGACTCTCAACA
CTGTCTTTGTATTGACCCGAAAACAAAATTAATGAACGAAAACATAGATGATGAATATTAACAGACATTAGCTAAGGTCTTGGCTC
TATATATATTTCAAAGGAGAGAAAGCTCTGATTTCATCCGTTTTGAAGATGGAATGTCCTCGACAGAAGAATCATCAGGACTTGAT
GATGATGATGATGATGATGATGATGGCGATGCTGTATCATCAATGTCTTCTGCAAGTTTTCTTTTGTTAGAATGGCTTAAGGTTTT
GCAATCATCTGATTCATTTCTCATTATAAGTTCTTTTATTCGCTTTACATCAGCTAGTTTCACCGGTTTTAACAGAAAATCCTCTG
CTCCTTCTCTCAGACATTGTTCTATACGAGGTAAGATGTTCTCAGATGACATAATCACAACTGGTATTTCTCTGAAAACAGAAGAT
TCCTTAATCTTCTTGAGAAGATCATATCCTGTTAGTCCTGGCATTGAGTAATCCGTCACTATCAAATTCACCTTCAAATCCTTAAG
ACCAGAAGCTCCCTTGTCTCCATCTAAGCCAAGGTACTGCAAAGCCATAGCCCCACTCTCTACAGTAGTCACTTTACAAGCAGAGA
TTCTTAGCAATCTCTCAATGACCTTACGATCCACAATACTATCATCAACGGCGAGAACATGTAACTCCGGCGAAGTACTGTTAAAT
CTCCACCGGCTGGAATATCCATCCTCATGACCTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893028 hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp. lyrata]7842e-081
NP_173339 two-component response regulator ARR7 [Arabidopsis thaliana]7081e-072
XP_002888998 hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp. lyrata]7044e-072
NP_177627 two-component response regulator ARR15 [Arabidopsis thaliana]6982e-071
XP_002511471 two-component sensor protein histidine protein kinase, putative [Ricinus communis]5952e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZWS7 Two-component response regulator ARR77086e-074
Q7G8V2 Two-component response regulator ARR156989e-073
Q9SB04 Two-component response regulator ARR55349e-054
Q9ZWS6 Two-component response regulator ARR65179e-052
O82798 Two-component response regulator ARR45097e-051

TrEMBL top hits (Blast detail)Scoree value
Q2HIJ6 At1g190507089e-073
B9R8Z6 Two-component sensor protein histidine protein kinase, putative5951e-059
B9IEK8 Type-a response regulator5564e-055
C6SY70 Putative uncharacterized protein5483e-054
B9IEK9 Type-a arp3-like response regulator (Fragment)5466e-054

Arabidopsis top hits (Blast detail)Scoree value
AT1G19050.1 ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator7086e-075
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator6988e-074
AT3G48100.1 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator5349e-055
AT5G62920.1 ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator5178e-053
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator5097e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members