 |
Information for unigene UN65776
| FASTA Sequence |
| Unigene ID: UN65776 | Length: 801 |
SSR | | GGGAGCTTGCTCTTCTCTCGGCCATCTTCTTAACGAGGTTTTTGAAGTTGTAGTAGAGCCAAAGCTTGTGCAGCCAACTTTTGTAT
TGGACTACCCAATCGAGATATCTCCCTTGGCCAAGCCACATCGCTGTAATGCAGGTTTGACTGAAAGATTTGAGCTGTTCATCTGT
GGCCGTGAAATGGCAAACGCATTCTCTGAACTGACTGATCCTGTGGACCAGAGGAGGCGGTTGGAAGAGCAAGTAAGGCAGCATAA
CGCAAAGCGAGCAGCGGCTGCATCAGAGACTCCTGAGCAAAAGGCAAAGAAAGATGATGATGATGATGATGACGATTCATGTGAAG
TGACACTAGACGAAGACTTTCTCACTGCCCTGGAATACGGGATGCCTCCTGCCTCTGGAATGGGGCTTGGTATTGACAGGCTGGTG
ATGCTGTTGACAAACTCTGCGAGTATAAGAGACGTCATTGCATTTCCTGTTCTGAAAGTTCAGCAGTAACACTTATGCCGAACTTG
GTAATACATGTTTGTAGCCTTAGCATTATTTGTGTATCTTTTGGGTTATTTCTCCAGCAGAGGAAGTGGAAGAAGAAACGCATGAG
GAGACTGAAGAGGAAGCGCAGAAGATGAGACAGCGATCCAAGTAGTCTTGTGTTTCAAATCCATGAATCTCTGTCGTTCCTTTCTA
GTTTCGTTCTTGAACCTTTTTTATGCATTGTGTTATCTTTTACATTGAAGTGGAACAATGGTGTGTAGAACATGCTTTGCTCACTA
CCTTTTATCATCTATCTATAAGCAGAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884969 hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp. lyrata] | 744 | 9e-077 |
| NP_187958 Lysyl-tRNA synthetase, class II [Arabidopsis thaliana] | 741 | 2e-076 |
| CAN72569 hypothetical protein VITISV_036995 [Vitis vinifera] | 670 | 3e-068 |
| XP_002285737 PREDICTED: hypothetical protein [Vitis vinifera] | 670 | 3e-068 |
| XP_002523412 lysyl-tRNA synthetase, putative [Ricinus communis] | 655 | 2e-066 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8DMA9 Lysyl-tRNA synthetase | 337 | 6e-031 |
| P73443 Lysyl-tRNA synthetase | 309 | 1e-027 |
| Q31KH4 Lysyl-tRNA synthetase | 302 | 7e-027 |
| Q5N1D9 Lysyl-tRNA synthetase | 302 | 7e-027 |
| Q7U9X5 Lysyl-tRNA synthetase | 300 | 1e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LJE2 Lysyl-tRNA synthetase | 741 | 1e-076 |
| A5BPH5 Lysyl-tRNA synthetase | 670 | 2e-068 |
| B9SBP3 Lysyl-tRNA synthetase | 655 | 1e-066 |
| Q6K1T2 Lysyl-tRNA synthetase | 646 | 1e-065 |
| C5WTY1 Lysyl-tRNA synthetase | 632 | 6e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13490.1 OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | 752 | 4e-080 |
| AT3G11710.1 ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | 199 | 6e-016 |
| AT3G30805.1 ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleotide binding | 126 | 2e-007 |
| AT4G33760.1 tRNA synthetase class II (D, K and N) family protein | 122 | 5e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
